Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0876 |
Symbol | |
ID | 8356990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1049617 |
End bp | 1050150 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644963030 |
Product | Peroxiredoxin |
Protein accession | YP_003120575 |
Protein GI | 256419922 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0386] Glutathione peroxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGATGC TGAAGACACT CTTAATTTCA ATGCTCTTGT TTATGAAAGG AGGCGCTATA TATGACTACA AGGTTGAATC TGTGGACGGT GGTAAGATCA ATTTCGCTGA TTATAAAGGC AAAAAGATCC TGATCGTAAA CACAGCTTCT ATGTGCGGTA ACACACCTCA GTACGCTGAA CTGGAAAAAC TCTACAAGAA ATACGAAAAG AATCTCGTGA TCATCGGTTT CCCGGCTAAC AATTTCGGCC AGCAGGAACC AGGCTCCAAC GCGGAGATCA AAGAATTCTG CACAAAAAAA TACGCTGTTA GCTTCCCGAT GGCTGCCAAG ATCTCCGTAA AAGGAACTGA CATTCACCCC CTCTACAAAT GGCTGGCAGA AGAAAGTAAA ACAAAACATT TCGAACCTGC TGAAGTACAA TGGAACTTCC AGAAATACCT GCTCGACGAA AAAGGTAACC TGGTAGCCGT ATTCTCTCCT AAAACACAAC CACTTTCTCC TGAAGTAACG GCCGCGATAG AAAAGAAATA CTAA
|
Protein sequence | MTMLKTLLIS MLLFMKGGAI YDYKVESVDG GKINFADYKG KKILIVNTAS MCGNTPQYAE LEKLYKKYEK NLVIIGFPAN NFGQQEPGSN AEIKEFCTKK YAVSFPMAAK ISVKGTDIHP LYKWLAEESK TKHFEPAEVQ WNFQKYLLDE KGNLVAVFSP KTQPLSPEVT AAIEKKY
|
| |