Gene Cpin_0851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0851 
Symbol 
ID8356965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1020402 
End bp1021064 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID644963005 
ProductRibonuclease H 
Protein accessionYP_003120550 
Protein GI256419897 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTTACGTT CATATCACCA AAAAGATATC GCTTTTGAAG CCGGCTGCGA CGAAGCCGGA 
CGGGGTTGCC TTGCGGGGCC GGTATTCGCA GCAGCTGTGA TTTTACCGCC TAAATTCAGG
AATAAACTCC TGAATGATTC AAAGCAGTTA AAGGCTTCCG ACCGCGATAA GTTGCGTGAA
GTAGTGGAAA AAGAGGCGAT AGCTTATGCG GTGGCCAGCG TGGATAACCT GGAGATAGAC
AGGATCAACA TCCTGAAAGC ATCTTTCAGA GCCATGCACC TGGCATTGGA CCAGCTAAAA
CAGCAACCGG GTTATATATT GGTAGATGGA AACAGGTTCG TTCCCTACGG AAAGACTCCC
CATGCCTGCA TTGTCAAAGG GGATGGCATA TATGCCTCCA TAGCGGCAGC CTCCATTCTG
GCCAAAACCT ACAGGGACGA GTACATGCAC AAGCTGCATC AGGAATATCC GCATTTCGGG
TGGTTGGAAA ATAAGGGATA CCCTACATTG TTCCACCGGG ATGCCATCCG CGCACATGGC
GAAACGCCTT ATCACCGGAA GACATTCAGA TTATTACCTG ACCAGCCGGA GCTGGATTTC
GATGCCCCTG TAGCGGAATA TACAGTTGTG AAAGTGGTTT CCCCGGAGGA AACCCAGGAT
TAG
 
Protein sequence
MLRSYHQKDI AFEAGCDEAG RGCLAGPVFA AAVILPPKFR NKLLNDSKQL KASDRDKLRE 
VVEKEAIAYA VASVDNLEID RINILKASFR AMHLALDQLK QQPGYILVDG NRFVPYGKTP
HACIVKGDGI YASIAAASIL AKTYRDEYMH KLHQEYPHFG WLENKGYPTL FHRDAIRAHG
ETPYHRKTFR LLPDQPELDF DAPVAEYTVV KVVSPEETQD