Gene Cpin_0847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0847 
Symbol 
ID8356961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1016448 
End bp1016882 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID644963001 
Productprotein of unknown function DUF306 Meta and HslJ 
Protein accessionYP_003120546 
Protein GI256419893 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3187] Heat shock protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.687312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATCA GATTAACAGC ACTGGCAATG GTTCTTCTTG CCAACACATG TAACCAGAAA 
GCTGTAAAAC AGGATATTGC CAGTATCCAG AGTAAAAGGT GGGCACTGAC GACGATGAAT
GGCGCAAAAC AGGAGAAATC TCCTATCTGG ATGGAATTTG ACCCGGCTAC CCATCGTTTT
AATGGTAATG GCGGCTGTAA TAAAGTAAGC GGCGAATATC AGCTGGAGGG TAGTGAAATC
ACCTTCGGAA AAGTGATCAG TACACGAATG GCTTGTATCG ATCCGCAGGG GAATGAAAGA
GAAAGCGCTT TTCTTCGTAT GCTTAGTGAC CGCACCTATA CTGTAAAGTT TGAAGACCAG
CTCTTACAGT TCCGTGATAG CGGGAGAGTA GCGATGTCTT TCACCGGATT CAAAAAAGTA
GCAAGCGCTA AATAA
 
Protein sequence
MFIRLTALAM VLLANTCNQK AVKQDIASIQ SKRWALTTMN GAKQEKSPIW MEFDPATHRF 
NGNGGCNKVS GEYQLEGSEI TFGKVISTRM ACIDPQGNER ESAFLRMLSD RTYTVKFEDQ
LLQFRDSGRV AMSFTGFKKV ASAK