Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0833 |
Symbol | |
ID | 8356947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 999213 |
End bp | 999878 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962987 |
Product | hypothetical protein |
Protein accession | YP_003120532 |
Protein GI | 256419879 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTAA GCAGACGTAT TCTCTTCTAT CTGTTCGCAG CTGTGATTCT TTACACCTGC TGGCTGATGC TGCTATTAAG CCTGCCCTAC ACGTCATTTG ACCGCTATGT GGATTTTCTG ATCACCAAAC AGCTGGTGTA TCATATCCGG CACTGGCGCA TCAGTTTCTA TGTGCATGTC TTTACGAGCG TAATTGTACT GCTTACCGGA CTCATTCAAT TCAGCATCTA TATACTAAAA AAATTTCCCG GCCTGCATCG CTGGTCCGGG AAAATATATG CGTTGGTTAT ACTCGCTTTC AGTGGTCCTT CCGGACTGAT TATGGGCTTT TATGCCAATG GCGGTCTGCC GGCAAGGACC AGCTTTGTCA TACTGGCTTC CTTATGGTTC CTCTTCACTT TTCTTGGCTG GCGTTATGCG ATGCAACGTC ACTGGAAACG GCATACCGAT ATGATGATCC GTAGTTATGC GCTTACACTG TCTGCCATTT CACTCCGTTT TTACGCTTTT CTCATTGGTT ATTTTAACCT GCCCATTCAT CCTGTTCAGG CATATATTCT TATCTCCTGG CTAAGCTGGA CACTCAATCT GCTGATTGCA GAAGCGATTA TCCGCCGGGG ACCGGGCTAT CTTAAAACCG CATTCCCAGC AGTGCGTCCT TCTTAA
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Protein sequence | MPVSRRILFY LFAAVILYTC WLMLLLSLPY TSFDRYVDFL ITKQLVYHIR HWRISFYVHV FTSVIVLLTG LIQFSIYILK KFPGLHRWSG KIYALVILAF SGPSGLIMGF YANGGLPART SFVILASLWF LFTFLGWRYA MQRHWKRHTD MMIRSYALTL SAISLRFYAF LIGYFNLPIH PVQAYILISW LSWTLNLLIA EAIIRRGPGY LKTAFPAVRP S
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