| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0817 |
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| Symbol | |
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| ID | 8356930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 979515 |
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| End bp | 980960 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962970 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_003120516 |
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| Protein GI | 256419863 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.255563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAA AAAATAACAA GGGAAGTCAT GAATCCCGTA GATCATTCCT AAAACAAGGT
GCGCTTGCTG CAGCTGGTTT TATGATCGTT CCACGTCACG TCTTAGGTGG TAAAGGTTTT
ATCGCTCCCA GCGATCGTTT ACGTGTTGCC GGTATTGGTG TTGGCGGTAA AGGCGAAAGC
GATCTGTCTG AGATTGCAAA AGGTCCTGCA GATATCACTT ACCTGTGCGA TGTAGACACC
CGCAGGGCGG CAGCTTCCGT TGCGCGTTTC CCCAAAGCGA AATTCTACAA AGACTTCAGG
GAAATGCTTG ACAAAGAGCA TAAACATATT GATGCAGTGA CGGTTTCCAC ACCTGACCAC
CAGCACGCAG TAGCGGCTAT GGCGGCTATG CAGCTGGGTA AACACGTATA TGTGCAGAAA
CCGTTGACCC ACGATATTTT CGAAGCGCGT GCACTGACTG CCGCCGCCCA GAAAAATAAA
GTAGTTACCC AGATGGGTAA CCAGGGTGCT TCCGGCGATG GCGTACGTCA GATGATGGAA
TGGTACAATG CCGGTCTGAT CGGTGATGTA CATACTGTTT ATTGCTGGAC AGACCGTCCG
GTATGGCCGC AAGGTATTCC ATGGTCCAGC ATGAAGGCTG AAGTGCCTAA AGAACTGGAT
TGGGATCTCT GGTTAGGTAC TGCTCCTTAC AAAGATTATA TCGATAAACT GGTACCGTTC
AACTGGCGTG GCTGGTGGGA TTATGGTACC GGCGCATTGG GTGACATGGG TTGTCATATC
ATTGAACCTC CATTCCGCAT TCTCGGACTT GGTTATCCGA AATCAGTAGA ATGTAGCGTA
GGTAGCGTTT ATGTAGACGA ATTCAAACGC GGCTACTTCC CTGAAAGCTG TCCTCCATCT
TCTCACGTAA TCCTGAAATT CGACGGCAAA AATGGTAAAG AAATCACCCT CCACTGGATG
GATGGCGGTA TCCAGCCAGA ACGCCCTGAA GAACTGGGAC CTAACGAAAT AATGGGTGAC
GGTGGTAACG GCGCGATCCT GATCGGCGAC AAAGGTAAAA TGATGTGTGG TACCTACGGT
AGAGATCCGC AGTTATTGCC AACCAGCAAA ACCAAACAGA CGAACACTCC GCAGACCATT
GCACGTGTAC CGGAAGGACA CTATGTACAG TGGGTAAATG CAGCAATCGC TGGTTTCAAT
AGTCCGAAAG ACAAACTGAT CAGCTCTCCG TTCTCTATTG CCGGTCCGCT GACAGAAACA
CTGCTGATGG CCAACCTCGC TATCAGAAGC TTCGACATCA AGAAAGAAAA AGAAGGTAAA
ACCAGCTTCC CCGGCCGTTA TATCAAACTG CTCTGGGATA GTAAGGAAAT GAAAATTACC
AACTTTGATG ATGCCAATCA ATTCGTTAAG AGAACATACC GTCAGGGCTG GAGCCTGGGC
GTATAA
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| Protein sequence | MVEKNNKGSH ESRRSFLKQG ALAAAGFMIV PRHVLGGKGF IAPSDRLRVA GIGVGGKGES
DLSEIAKGPA DITYLCDVDT RRAAASVARF PKAKFYKDFR EMLDKEHKHI DAVTVSTPDH
QHAVAAMAAM QLGKHVYVQK PLTHDIFEAR ALTAAAQKNK VVTQMGNQGA SGDGVRQMME
WYNAGLIGDV HTVYCWTDRP VWPQGIPWSS MKAEVPKELD WDLWLGTAPY KDYIDKLVPF
NWRGWWDYGT GALGDMGCHI IEPPFRILGL GYPKSVECSV GSVYVDEFKR GYFPESCPPS
SHVILKFDGK NGKEITLHWM DGGIQPERPE ELGPNEIMGD GGNGAILIGD KGKMMCGTYG
RDPQLLPTSK TKQTNTPQTI ARVPEGHYVQ WVNAAIAGFN SPKDKLISSP FSIAGPLTET
LLMANLAIRS FDIKKEKEGK TSFPGRYIKL LWDSKEMKIT NFDDANQFVK RTYRQGWSLG
V
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