Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0758 |
Symbol | |
ID | 8356870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 923326 |
End bp | 924630 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644962910 |
Product | zinc finger SWIM domain protein |
Protein accession | YP_003120457 |
Protein GI | 256419804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTCCTAA CAGAAGAACA GGTGCTTTCC TTAGCACCGG ACGAAGCTTC CAGGAAAGCC GGAAAGGCCC TGGCTGGTGC AGCAAAATGG GTGAGTAAAG GGGCGAATGA ACATGCCTTG TGGGGAGAAT GCCAGGGGAG TGGCAGCAAA CCGTATCAAA CCCAGATAGA CCTCGCCGGA ACCGCTTTCA AATGTAGTTG TCCGAGCCGC AAATTTCCGT GCAAACATGG TATTGGCCTC ATGTTGCTGT ATGCCCGTGA GTCCGCTACC TTCACTGACA ACACGCCTCC TTCCTGGGTC AGTGAATGGC TGGAAAAAAG AGCCGGCAAA GAAATCAAGA AACAGGAAAA AGAAGAAAAA CCGGTAGACG AAGCTGCCCG CGATAAACGG CAACTGGCCC GTCAGCAGAA AGTGGAAGAT GGTATCCACG AACTGCTGCT CTGGATGAAA GATATCATCC GTAACGGCCT GCTGCAATTA CCGGAAAAAG GCGCCTCCTA CTGGGAAACC ATGGCCCGCC GTATGGTGGA TGCACAGGCG CCCGGATTGG CGGCGATGGT ACGTGGCCTC TCAGAGATCA ATTTCTATAG TGAAGGCTGG CAACATACCT TCATGGAACA ATTGCTCCGT ATTTATCTCG TTATCCAGGG TTTCAGACAG GGAGAAACAC TTCCTACCCT GTTACAACAG GAGCTTCGCA CCCTTGTCGG ATTCACGCAA AGTCAGGAAG CTTTGCGACA AGAGAAGGGC ACAAAAGATA CCTGGCTGAT TCTCAACAAA CAAGTCACCG AAGAAGATAA TCTTACCACC GAGAAATACT GGCTTTATGG CCTTCATTCC TATCAGCCGG CACTGGTACT CCAGTTCTAT GCAAGAGGTA TGTCCAGACC ACAACTGCTG TTAACGGCAG GTATGTCTAT CGAAGCAGAA CTGGTGTTCT ATCCTTCCGA GATTCCGTTG AGGGCGCTGA TCAAAGAACC TGTTACCAAC AACAATCTCC AGGATACCTA TGGTCTTCCC GGCTGGCAGG AACTAACAGC CGCAGAAACT TTACTGGTAG AGAAGATGCC TGTCCGCAGC GAACGCCCTT ATATTGTACA ACAGCTAACG CCTGTTCAGC ACAATATGAA ATGGTGGCTG AAAGACAGCA ACGATCAGAT CATGCCTGTG ATAGACGGTT TCCGTAATAT CTGGAAACTG CTCTCCCTCA GTGGTGGTCA ACCATTGGAT ATGGCATTGC TGGGTAAGGA ACAGGAATAT GAACCCCTGG GCGTCTGGCA CGACGGCGTC TATAAATTGT TATAA
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Protein sequence | MLLTEEQVLS LAPDEASRKA GKALAGAAKW VSKGANEHAL WGECQGSGSK PYQTQIDLAG TAFKCSCPSR KFPCKHGIGL MLLYARESAT FTDNTPPSWV SEWLEKRAGK EIKKQEKEEK PVDEAARDKR QLARQQKVED GIHELLLWMK DIIRNGLLQL PEKGASYWET MARRMVDAQA PGLAAMVRGL SEINFYSEGW QHTFMEQLLR IYLVIQGFRQ GETLPTLLQQ ELRTLVGFTQ SQEALRQEKG TKDTWLILNK QVTEEDNLTT EKYWLYGLHS YQPALVLQFY ARGMSRPQLL LTAGMSIEAE LVFYPSEIPL RALIKEPVTN NNLQDTYGLP GWQELTAAET LLVEKMPVRS ERPYIVQQLT PVQHNMKWWL KDSNDQIMPV IDGFRNIWKL LSLSGGQPLD MALLGKEQEY EPLGVWHDGV YKLL
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