Gene Cpin_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0758 
Symbol 
ID8356870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp923326 
End bp924630 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content50% 
IMG OID644962910 
Productzinc finger SWIM domain protein 
Protein accessionYP_003120457 
Protein GI256419804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTCCTAA CAGAAGAACA GGTGCTTTCC TTAGCACCGG ACGAAGCTTC CAGGAAAGCC 
GGAAAGGCCC TGGCTGGTGC AGCAAAATGG GTGAGTAAAG GGGCGAATGA ACATGCCTTG
TGGGGAGAAT GCCAGGGGAG TGGCAGCAAA CCGTATCAAA CCCAGATAGA CCTCGCCGGA
ACCGCTTTCA AATGTAGTTG TCCGAGCCGC AAATTTCCGT GCAAACATGG TATTGGCCTC
ATGTTGCTGT ATGCCCGTGA GTCCGCTACC TTCACTGACA ACACGCCTCC TTCCTGGGTC
AGTGAATGGC TGGAAAAAAG AGCCGGCAAA GAAATCAAGA AACAGGAAAA AGAAGAAAAA
CCGGTAGACG AAGCTGCCCG CGATAAACGG CAACTGGCCC GTCAGCAGAA AGTGGAAGAT
GGTATCCACG AACTGCTGCT CTGGATGAAA GATATCATCC GTAACGGCCT GCTGCAATTA
CCGGAAAAAG GCGCCTCCTA CTGGGAAACC ATGGCCCGCC GTATGGTGGA TGCACAGGCG
CCCGGATTGG CGGCGATGGT ACGTGGCCTC TCAGAGATCA ATTTCTATAG TGAAGGCTGG
CAACATACCT TCATGGAACA ATTGCTCCGT ATTTATCTCG TTATCCAGGG TTTCAGACAG
GGAGAAACAC TTCCTACCCT GTTACAACAG GAGCTTCGCA CCCTTGTCGG ATTCACGCAA
AGTCAGGAAG CTTTGCGACA AGAGAAGGGC ACAAAAGATA CCTGGCTGAT TCTCAACAAA
CAAGTCACCG AAGAAGATAA TCTTACCACC GAGAAATACT GGCTTTATGG CCTTCATTCC
TATCAGCCGG CACTGGTACT CCAGTTCTAT GCAAGAGGTA TGTCCAGACC ACAACTGCTG
TTAACGGCAG GTATGTCTAT CGAAGCAGAA CTGGTGTTCT ATCCTTCCGA GATTCCGTTG
AGGGCGCTGA TCAAAGAACC TGTTACCAAC AACAATCTCC AGGATACCTA TGGTCTTCCC
GGCTGGCAGG AACTAACAGC CGCAGAAACT TTACTGGTAG AGAAGATGCC TGTCCGCAGC
GAACGCCCTT ATATTGTACA ACAGCTAACG CCTGTTCAGC ACAATATGAA ATGGTGGCTG
AAAGACAGCA ACGATCAGAT CATGCCTGTG ATAGACGGTT TCCGTAATAT CTGGAAACTG
CTCTCCCTCA GTGGTGGTCA ACCATTGGAT ATGGCATTGC TGGGTAAGGA ACAGGAATAT
GAACCCCTGG GCGTCTGGCA CGACGGCGTC TATAAATTGT TATAA
 
Protein sequence
MLLTEEQVLS LAPDEASRKA GKALAGAAKW VSKGANEHAL WGECQGSGSK PYQTQIDLAG 
TAFKCSCPSR KFPCKHGIGL MLLYARESAT FTDNTPPSWV SEWLEKRAGK EIKKQEKEEK
PVDEAARDKR QLARQQKVED GIHELLLWMK DIIRNGLLQL PEKGASYWET MARRMVDAQA
PGLAAMVRGL SEINFYSEGW QHTFMEQLLR IYLVIQGFRQ GETLPTLLQQ ELRTLVGFTQ
SQEALRQEKG TKDTWLILNK QVTEEDNLTT EKYWLYGLHS YQPALVLQFY ARGMSRPQLL
LTAGMSIEAE LVFYPSEIPL RALIKEPVTN NNLQDTYGLP GWQELTAAET LLVEKMPVRS
ERPYIVQQLT PVQHNMKWWL KDSNDQIMPV IDGFRNIWKL LSLSGGQPLD MALLGKEQEY
EPLGVWHDGV YKLL