| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0702 |
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| Symbol | |
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| ID | 8356814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 844836 |
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| End bp | 846017 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962854 |
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| Product | PDZ/DHR/GLGF domain protein |
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| Protein accession | YP_003120401 |
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| Protein GI | 256419748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTCTGT TCCACGTTGC CTCTGCGCAA ACGACACCTG CACCTGTAAG CACTCCTAAA
GAAGGTGAGC TGATTACCCG TTTCCCGTTC AAACAGTATT ATGGTGGCGT AGTCGTCATC
CGGGCTTGTC TGGCTGGCAT TCCCGATACA CTCCAGTTCA TCCTGGACAC CGGTAGCGCC
GGTATTTCGC TGGATACCAG TACCTGTCTG CAACTGGGCA TTAAACTGAC GCCTACTGAC
CGTATTGTCA GAGGGGTAGG AGGTTCAAAA ACCGTGGCCT TCGCCATGGA CAAAACACTG
TTATTGCCTG GTTTACAGGT GGATAGCCTG GACTTCCACA TCAATGATTA TGAGCTTATC
AGCCAGGTAT ATGGCTTGCA GATCGATGGT ATTATAGGAT ATAGCCTGTT AAGTAAATAC
ATTGTGCAGG TCGACTACGA CACAGAAACC ATTTCCATCT ACCAGAAAGG AAAATTCAAT
TATCCGAGAG GCGGTCACCT GATGCGCCCA TCGCTGACGC TGATCCCCAT CGTCAATGCT
TTCCTGAAAA ACGGGAAAGC ACAGCACTTC AACCGCTACT ATTTTGACAC CGGCGCAGGA
ATGTGCCTGC TGCTGTCCCA TCAGTTTGTA CAGGACAGCG CGATTCTGTC TTCCCGGAAA
AGACAACGTA AAGTCATTCA AACGGAAGCA CAGGGACTGG GCGGCAAAAT GAACATGGAT
ATCACCACTT TACAGGAATT CAAGATCGGC AACTACTCCT TCCGGAATGT ACCCGTTTAC
CTCTTTGACG ACGTCACCAA TGTCACCGCC TATCCTTTCC TGGGAGGAAT GGTCGGCAAC
GACCTCCTGC GCCGGTTTAA CCTGATACTC AACTACGGCA AAAAGGAGAT CTACCTGATA
CCTAACTCGC ATTATAAAGA CCCTTTTGAC TACTCCTACA CGGGCCTGAT CATCTACCTC
ATAGATGGCA GGGTAGAGAT CACGGATATT ATCAAAGGTT CTCCCGCTGA AAAAGCCGGT
TTGCAGAAAG GCGACATTAT CATGGCGATC AACAATACCT TTTCCAACAA TTTGCAGATA
TACCGCGATC TGCTGAAAAA TGTAGGCACC CGTCCTTCAC TCCTGATCAT GCGCAACAAA
GAGTTGCTGA TAAAAAAAAT GCAGATCAAA AGCATATTAT AA
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| Protein sequence | MCLFHVASAQ TTPAPVSTPK EGELITRFPF KQYYGGVVVI RACLAGIPDT LQFILDTGSA
GISLDTSTCL QLGIKLTPTD RIVRGVGGSK TVAFAMDKTL LLPGLQVDSL DFHINDYELI
SQVYGLQIDG IIGYSLLSKY IVQVDYDTET ISIYQKGKFN YPRGGHLMRP SLTLIPIVNA
FLKNGKAQHF NRYYFDTGAG MCLLLSHQFV QDSAILSSRK RQRKVIQTEA QGLGGKMNMD
ITTLQEFKIG NYSFRNVPVY LFDDVTNVTA YPFLGGMVGN DLLRRFNLIL NYGKKEIYLI
PNSHYKDPFD YSYTGLIIYL IDGRVEITDI IKGSPAEKAG LQKGDIIMAI NNTFSNNLQI
YRDLLKNVGT RPSLLIMRNK ELLIKKMQIK SIL
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