| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0680 |
|---|
| Symbol | |
|---|
| ID | 8356792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 821460 |
|---|
| End bp | 821675 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962832 |
|---|
| Product | cytochrome oxidase maturation protein, cbb3- type |
|---|
| Protein accession | YP_003120379 |
|---|
| Protein GI | 256419726 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3197] Uncharacterized protein, possibly involved in nitrogen fixation |
|---|
| TIGRFAM ID | [TIGR00847] cytochrome oxidase maturation protein, cbb3-type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.601638 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGA TCATCATCCT TCTCGGAGCC AGCCTGCTGG TAGCCCTATT CTTTCTGGCG
GCTTTTATAT GGTCAGTAAG GAATGGACAA TTTGAAGATA ATTTCTCTCC TGCACATCGT
GTACTGTTCG AAACCAAACC GGCCGAAACG ACCTGCAAAT CAGGGAATGC ATGTACAAAC
ACCAACTGTA AATCACGCAT CTGCCAGCAC AACTAA
|
|---|
| Protein sequence | MSVIIILLGA SLLVALFFLA AFIWSVRNGQ FEDNFSPAHR VLFETKPAET TCKSGNACTN
TNCKSRICQH N
|
|---|
| |