Gene Cpin_0670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0670 
Symbol 
ID8356782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp811500 
End bp812258 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content47% 
IMG OID644962822 
ProductSH3 type 3 domain protein 
Protein accessionYP_003120369 
Protein GI256419716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TATTTACCGT TATATGTGCT TTCTTACTGC TGTATCACAT AGCAGGCGCT 
GCTTCAGCGC CACAGCAGGC ATTTGAAAAA GCCAACGGCC TTTTTAAAGA GAAACAATAT
ACAGAAGCTG CCAACATTTA CCAGCAGCTG ATCGACCAGG GATTTGGTCA GCCGGAACTA
TATCTCAATG CCGGCAACGC CTGGTACAAG GCCAATAAAA CAGGCCTGGC CGTTTATAAT
TATGAAAAGG CGCTTTCAGC GGACCCTTTC AATAAGTCGG CGGCTCACAA CCTGGCAGTT
GCCAATCAAA GAGTAGAAGG ATATGTCAAT GACCTGCCGC TGTTATTCTT TCAGCAGTGG
TGGTTGCATG TATTACATTT TCATAGTCCG GATGGATGGG CCACAGGGGC CATTCTTTTA
TTCTGGCTTT CCATCACCGG CATCGTTGTA TTGCTGCTCA TTCCTGCATT CAAACCAGTA
TTGATGCGAT GGGGGGCAGG CGTTCTGGCG ACTGGATTTC TGTTTTATCT GATCATGGGT
ATCAGTGCAT ACCTGACCAC CAATACACAC GATCAGGGTA TCATTATGGG TACTGCTGTA
AAGGTAAAAG CGGCGCCTGA TAATGAAAGT AAAGACATGT TTGAACTGCA TGAAGGAGTA
AAAGTGCAGG TAACAGATGC GACCCAGGAA TTCTGTAAGA TATCGCTGCC GGATGGCAAG
ACCGGCTGGC TGGCTTGTGC AGAGATCAAG AGGTTGTAG
 
Protein sequence
MKKIFTVICA FLLLYHIAGA ASAPQQAFEK ANGLFKEKQY TEAANIYQQL IDQGFGQPEL 
YLNAGNAWYK ANKTGLAVYN YEKALSADPF NKSAAHNLAV ANQRVEGYVN DLPLLFFQQW
WLHVLHFHSP DGWATGAILL FWLSITGIVV LLLIPAFKPV LMRWGAGVLA TGFLFYLIMG
ISAYLTTNTH DQGIIMGTAV KVKAAPDNES KDMFELHEGV KVQVTDATQE FCKISLPDGK
TGWLACAEIK RL