Gene Cpin_0592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0592 
Symbol 
ID8356703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp723837 
End bp724616 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content50% 
IMG OID644962743 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003120291 
Protein GI256419638 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCT CTCTCTTGCT CGACATCCAG GATAGTGTTG CTACGATCAC CCTCAACCGC 
CCGGATGTTT ACAACGCATT TAATGATCCA CTGAGCTATG AATTACAGGA TGCCCTCAAA
CAGGCAGAGA AAGATGCTGC CGTCAGGGTA GTGGTATTGA CTGGTGCAGG TAAAGCATTC
TGTAGCGGCC AGGACCTCAA AGCCGCTATG AATGGCGAAA AACGTAATCT CAGTGAATCC
CTGCATAAAC GCTATAATCC TATCATCAGG GCCATCCGGA ATATGCCGAA GCCTGTCATC
TGCCAGTTAA ACGGTGTGGC CGCAGGCGCT GGCTGCTCCC TGGCGCTGGC CTGTGATATG
ATCATCGCCA GCGAAACGGC ATCCATGGTG GAGATCTTCA TCAACATTGC GCTGGTGCTG
GATTCAGGTT CCTCTTACTT CCTGCCACGT ACCGTAGGCT ATCACAAGGC ATTTGAACTG
GCTACCAAAG CCAGTAAAAT GACGGCCCTG GAAGCCCAGC AACTGGGTTT TATCAATAAA
GTGGTCCCTG CCGGAGAACT GGAAGCCACT GTAAAAGCGG AGGCAGCATT CTATGCCAAC
GCACCTACGA AAGCAATCGC CCTTTTGAAG AAAATGCTCA CAAAGGGGAT GACAGAAAAC
CTGGATGCAG TGCTCGATTA TGAGGCTTAT TGCCAGGAAA TAGCAGGTAA TACCGCTGAT
AATACAGAAG GGATACAGGC ATTTCTGGAG AAACGTAAAC CTGTTTTTAA AGGCGTCTGA
 
Protein sequence
MFTSLLLDIQ DSVATITLNR PDVYNAFNDP LSYELQDALK QAEKDAAVRV VVLTGAGKAF 
CSGQDLKAAM NGEKRNLSES LHKRYNPIIR AIRNMPKPVI CQLNGVAAGA GCSLALACDM
IIASETASMV EIFINIALVL DSGSSYFLPR TVGYHKAFEL ATKASKMTAL EAQQLGFINK
VVPAGELEAT VKAEAAFYAN APTKAIALLK KMLTKGMTEN LDAVLDYEAY CQEIAGNTAD
NTEGIQAFLE KRKPVFKGV