Gene Cpin_0590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0590 
Symbol 
ID8356701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp720460 
End bp721650 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content48% 
IMG OID644962741 
ProductGTP-binding proten HflX 
Protein accessionYP_003120289 
Protein GI256419636 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGAAA AGAAACAAGT TGTACAACAG GAAGAACGGG CCGTTATTGT GGGCGTAATC 
CACAAGGAGC AGTCAGACCG TCAGGTACAG GAGTATCTGG ATGAGCTGGT TTTCCTCGCT
GAGACGGCTG GTGCTATAAC TGTAAAAAAG TTCACCCAAA AACTGGCCCG TCCCGACAGA
GCGACCTTCG TTGGAAAGGG TAAGCTGGAA GAGATCAGGG ATTTCATTGC AGGAAGAAAT
ATCAATCTGG TCATTTTTGA CGATGAACTG ACCGGTTCTC AGATAGCGAA CATAGAGAAA
GTGCTGAATG TGAAGGTGAT AGACCGTAGT GACCTCATTC TGGACATCTT TGCCCGCCGT
GCCCGTACGG CTCAGGCGAA AGTGCAGGTA GAGCTGGCCC AGTACCAGTA TATCCTGCCA
CGTCTGAAAG GTATGTGGAG TCACCTGGAA AGACAGGGAG GTGGTATCGG TAGCCGTGGT
CCGGGTGAAA CGGAGATTGA AACAGACCGT CGTATCATTA AGGAAAAGGT AGCCCTGCTC
AGGAAAAGGC TGGCGGAAAT TGATAAGCAG TCACTTACCC AGCGTAAGGA CCGTGGTGAA
TACATCCGTG TAGCCCTGGT AGGATATACC AACGTGGGTA AGAGTACCAT CATGAACCTG
ATGAGTAAAA GCGAGGTATT TGCCGAAAAC AAGCTGTTTG CGACGCTGGA TACGACTACC
CGTAAGGTGG TATTTGACCA GACCGCATTC CTGCTGAGCG ATACCGTAGG GTTTATCCGT
AAACTCCCTC ACCACCTGGT AGAGAGCTTC AAATCGACCC TGGATGAGGT AAGAGAAAGC
GATATTCTGC TGCATGTAGT GGATGTTTCC CATCCACAGT ATGAAGACCA GGTAGAGGTG
GTAAACCGCA CATTGCACGA ACTGAAGGCC TTCGATAAGC CTATCATCAT GGTCTTCAAT
AAGATGGACC TGTATGAAGA GCAGACGTTC GACAAATGGC TGACGGAGGA TATCAAACAG
GATATTCTGA ATCAGCTGAA GGAAAACTGG CAGACCAGAA CCCAGGGTAA CTGTGTGTTT
ATTTCTGCAA CGGAGCGCAA AAATGTCGAA GAACTGCGGG CGACTATCCT CAGTAAGGTA
GTGGAACTGT ATCGGGTACG TTATCCTTAC AAGAGCGAAT ATTTCTATTA A
 
Protein sequence
MIEKKQVVQQ EERAVIVGVI HKEQSDRQVQ EYLDELVFLA ETAGAITVKK FTQKLARPDR 
ATFVGKGKLE EIRDFIAGRN INLVIFDDEL TGSQIANIEK VLNVKVIDRS DLILDIFARR
ARTAQAKVQV ELAQYQYILP RLKGMWSHLE RQGGGIGSRG PGETEIETDR RIIKEKVALL
RKRLAEIDKQ SLTQRKDRGE YIRVALVGYT NVGKSTIMNL MSKSEVFAEN KLFATLDTTT
RKVVFDQTAF LLSDTVGFIR KLPHHLVESF KSTLDEVRES DILLHVVDVS HPQYEDQVEV
VNRTLHELKA FDKPIIMVFN KMDLYEEQTF DKWLTEDIKQ DILNQLKENW QTRTQGNCVF
ISATERKNVE ELRATILSKV VELYRVRYPY KSEYFY