Gene Cpin_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0564 
Symbol 
ID8356670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp685789 
End bp686874 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content46% 
IMG OID644962710 
Producthypothetical protein 
Protein accessionYP_003120263 
Protein GI256419610 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC GCAATTTCCT GAAATCAATC GGTCTTGGTA GTCTGGCTAT CATGCAACCC 
GGCTTACCAA CCCTGTCCGC AACAGCGAAA GCAGCAACCC TGCCTGCAGC TAAAGCGAAA
CACCGTGTCT GGATCAATCC GGATGAAAAA GACACTACTG CCGATCTGCA AAAGCGTTAT
GCTGCCTATA AAAAAGCAGG TATCGGACTT ATTTTCTTCG AAGCAGACAG TGAAAAACAT
TTCAGAGCGG CTAAAGAAAA TGGTATCCAG GCACACCGAT GGATCTGGAC AATGAATCGC
GGTGAGAAGG AATTGCTGGC CAGCCATCCT GAATGGTATG CTAAAAACAG AAAAGGAGAA
TCCTGTGCAA CACATCCACC ATATGTAGGT TATTACCGCT GGCTTTGTCC GAGCAAACCA
GAAGTGATCA ACTACCTGAA AGAACAGGCA GAAGCCGTAT TGTCTAAAGA CTATGTAGAC
GGTTTACACC TGGATTATGT GCGTTATTGT GATGTGGTAT TGCCGGTAAA CCTCTGGAGC
AACTACGGTA TCGATCAGTC AAAAGAACTG CCTGAATATG ATTTCTGCTA TTGCGAAACC
TGCCGGGAAA AATATAAAGA GCAAAAAGGG GTTGATCCGC TGGATATGGA ACATCCTGAT
CAGATTCCTT CCTGGAGAAG ATTCAGGTAC AACCGCATTA CCAATGTGGT GAACAATCTG
GCAGCAGTAG CCAAACAACA CAAAAAGCCA ATCTCCGCAG CAGTATTCCC TACACCAGAT
ATCGCTAAAC GTATTGTGAG ACAGGATTGG ACAAACTGGC CGCTGGATTC TGTAAATCCG
ATGATCTATC ACGGCTTCTA TAAAGAAGAT GTAAACTGGA TAGGAGAGGC GGTAGCTGAA
GGCGTAGGCG GTCTGCATGG TAAATTCCCA TTATACGCAG GTTTATACCT GCCGGATTTC
CATGGTAATA TGGCTGATCT GGAAAAAGGT ATTCGTCTGG CCATACAGAA TGGTGCAGCA
GGTGTGTCCC TGTTTGGCGG CATAGATGAC GCAGTATTGA GCACGTTGCA AAAGGCCAGT
GTTTAA
 
Protein sequence
MNKRNFLKSI GLGSLAIMQP GLPTLSATAK AATLPAAKAK HRVWINPDEK DTTADLQKRY 
AAYKKAGIGL IFFEADSEKH FRAAKENGIQ AHRWIWTMNR GEKELLASHP EWYAKNRKGE
SCATHPPYVG YYRWLCPSKP EVINYLKEQA EAVLSKDYVD GLHLDYVRYC DVVLPVNLWS
NYGIDQSKEL PEYDFCYCET CREKYKEQKG VDPLDMEHPD QIPSWRRFRY NRITNVVNNL
AAVAKQHKKP ISAAVFPTPD IAKRIVRQDW TNWPLDSVNP MIYHGFYKED VNWIGEAVAE
GVGGLHGKFP LYAGLYLPDF HGNMADLEKG IRLAIQNGAA GVSLFGGIDD AVLSTLQKAS
V