Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0564 |
Symbol | |
ID | 8356670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 685789 |
End bp | 686874 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644962710 |
Product | hypothetical protein |
Protein accession | YP_003120263 |
Protein GI | 256419610 |
COG category | [S] Function unknown |
COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAAC GCAATTTCCT GAAATCAATC GGTCTTGGTA GTCTGGCTAT CATGCAACCC GGCTTACCAA CCCTGTCCGC AACAGCGAAA GCAGCAACCC TGCCTGCAGC TAAAGCGAAA CACCGTGTCT GGATCAATCC GGATGAAAAA GACACTACTG CCGATCTGCA AAAGCGTTAT GCTGCCTATA AAAAAGCAGG TATCGGACTT ATTTTCTTCG AAGCAGACAG TGAAAAACAT TTCAGAGCGG CTAAAGAAAA TGGTATCCAG GCACACCGAT GGATCTGGAC AATGAATCGC GGTGAGAAGG AATTGCTGGC CAGCCATCCT GAATGGTATG CTAAAAACAG AAAAGGAGAA TCCTGTGCAA CACATCCACC ATATGTAGGT TATTACCGCT GGCTTTGTCC GAGCAAACCA GAAGTGATCA ACTACCTGAA AGAACAGGCA GAAGCCGTAT TGTCTAAAGA CTATGTAGAC GGTTTACACC TGGATTATGT GCGTTATTGT GATGTGGTAT TGCCGGTAAA CCTCTGGAGC AACTACGGTA TCGATCAGTC AAAAGAACTG CCTGAATATG ATTTCTGCTA TTGCGAAACC TGCCGGGAAA AATATAAAGA GCAAAAAGGG GTTGATCCGC TGGATATGGA ACATCCTGAT CAGATTCCTT CCTGGAGAAG ATTCAGGTAC AACCGCATTA CCAATGTGGT GAACAATCTG GCAGCAGTAG CCAAACAACA CAAAAAGCCA ATCTCCGCAG CAGTATTCCC TACACCAGAT ATCGCTAAAC GTATTGTGAG ACAGGATTGG ACAAACTGGC CGCTGGATTC TGTAAATCCG ATGATCTATC ACGGCTTCTA TAAAGAAGAT GTAAACTGGA TAGGAGAGGC GGTAGCTGAA GGCGTAGGCG GTCTGCATGG TAAATTCCCA TTATACGCAG GTTTATACCT GCCGGATTTC CATGGTAATA TGGCTGATCT GGAAAAAGGT ATTCGTCTGG CCATACAGAA TGGTGCAGCA GGTGTGTCCC TGTTTGGCGG CATAGATGAC GCAGTATTGA GCACGTTGCA AAAGGCCAGT GTTTAA
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Protein sequence | MNKRNFLKSI GLGSLAIMQP GLPTLSATAK AATLPAAKAK HRVWINPDEK DTTADLQKRY AAYKKAGIGL IFFEADSEKH FRAAKENGIQ AHRWIWTMNR GEKELLASHP EWYAKNRKGE SCATHPPYVG YYRWLCPSKP EVINYLKEQA EAVLSKDYVD GLHLDYVRYC DVVLPVNLWS NYGIDQSKEL PEYDFCYCET CREKYKEQKG VDPLDMEHPD QIPSWRRFRY NRITNVVNNL AAVAKQHKKP ISAAVFPTPD IAKRIVRQDW TNWPLDSVNP MIYHGFYKED VNWIGEAVAE GVGGLHGKFP LYAGLYLPDF HGNMADLEKG IRLAIQNGAA GVSLFGGIDD AVLSTLQKAS V
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