| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0548 |
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| Symbol | |
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| ID | 8356654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 653263 |
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| End bp | 654276 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962694 |
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| Product | hypothetical protein |
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| Protein accession | YP_003120247 |
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| Protein GI | 256419594 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03519] Bacteroidetes-specific putative membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAATA AGAATATACT CTTTGTTGTC GGAACCGTGC TGATTGCATT GATGCCAGGC
TGGGTAAAGG CACAGGTAGA TCCTCACTTC TCCCAGTATT ATGCTTATCC CATGTGGCTG
AACCCTGCGT TGACAGGTAT TGTTGATGGG GATTATCGTG TCAGTGCCAA TTATCGTAAC
CAATGGGTAA ACATCGGAAA GCCTTTTTCC ACAGTAGGCG TATCGTTTGA TGCAGCTGCG
GCCAATAACA TCGGTGTAGG TCTGAATATC ACAAACATGT CTGCCGGTGA TGCAGGGTAT
AACTATCTCA ATGCAATGGC CAGTTTCTCA TACCGTGGTG TACGCTTTGG CGAAACCGGT
ACCAGCCAGC TGGTATTTGG TATCCAGGCG GGTATGATCA ACCGTAAAAT AGATCCTGCG
AAATGGCAAT TGGGTAGTCA GTATGATCCG GTGATGGGAT TTGATCCCTC TAAACCAAGT
GGAGAGAATA TCAGTACGAC ATCTTCCAAC TCTTTTGATG CCGCTGCAGG TGTCATGTTC
TTCGATGGTA ACCCTAACCA CCAGTTCAAT CCATTTGCAG GTTTCTCTGC CGGACACCTT
ACACAGCCGC AGGATCCATT TGTATCTGCC GGCTCTAATA AACGGCTGCC GGTAAGATAT
ATCGGACATG GTGGTACACG TATCAAGCTG AATGAGATAT TCAGTCTTAC GCCACACGGT
TTATACATGC GCCAGGGAAA TGCGCATGAG ACAGTGGTGG GCTTATATGG TCAGGCATAC
CTGAATGAGG AGTTTGACTT CCTGCTGGGA GCAAACTACC GTATCAATGA CTCCGCGATT
CCTTTTGCAG GTTTCCACTT CAAAAATTTT GTGCTGGGTC TCAGTTATGA TGTGAACGCA
TCTAATCTCA GAAGATTAGT GAACGGTAGT AACAGCTTTG AACTATCCTT ATCCTTCATA
AGCAGGAAGA AGAAAGTTTA TTCTGAAGAG AATTTCTTTT GCCCGCGGTT GTAA
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| Protein sequence | MKNKNILFVV GTVLIALMPG WVKAQVDPHF SQYYAYPMWL NPALTGIVDG DYRVSANYRN
QWVNIGKPFS TVGVSFDAAA ANNIGVGLNI TNMSAGDAGY NYLNAMASFS YRGVRFGETG
TSQLVFGIQA GMINRKIDPA KWQLGSQYDP VMGFDPSKPS GENISTTSSN SFDAAAGVMF
FDGNPNHQFN PFAGFSAGHL TQPQDPFVSA GSNKRLPVRY IGHGGTRIKL NEIFSLTPHG
LYMRQGNAHE TVVGLYGQAY LNEEFDFLLG ANYRINDSAI PFAGFHFKNF VLGLSYDVNA
SNLRRLVNGS NSFELSLSFI SRKKKVYSEE NFFCPRL
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