Gene Cpin_0524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0524 
Symbol 
ID8356630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp621690 
End bp622898 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content45% 
IMG OID644962670 
Producthypothetical protein 
Protein accessionYP_003120223 
Protein GI256419570 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.140722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGACC AATTTGTAGT ACCGGCAAGA TTAAAAAGGA CCAGCTTCGT GTTAATGGGT 
GTTGGCTTGC TGACTTTATT GATCGGAATT TTTGCATTTC ATGGTGAGCA TGGCTCTACA
CGTTTCTGGG CTGGCCTCCT CCAGAACAGC ACATTCTTTT TGTTGGTAGT ATTAGCCAGT
GCCTTTTTTA TCGGAGCTAC TACCCTGGCG CATGGTGGAT GGCAGATTGG TTTCCGTCGT
GTACCGGAAG CAATTTCCAT GGCAGTACCT GTACTGGGCG GGATTCTGTT CGTGATCCTC
ATGTTAATTG CGTTCACTGG TAAAGAGAAT ATCTACCACT GGTTAAACGC AGAGCATGTT
AAACATGACG AAATATTAAG CTGGAAATCA GCTTTTTTGA ATAAAGGAAT GTTCACAGCG
TTTTCGGTTG TTACAATCGG CGCATGGAGC TTCTTCGCAG TAAAACTGCG TAAAATGTCC
ATCGAAGAAG ATGGCTGGGA TCTGTCCGCA GCTACCGGTC GTCGTATCGT ATGGAGAAAT
ACAGTATGGT GTGGTGGATT CATCGTGGTT TACGCACTGA CTGTAGGTTC TACTACCCCA
TGGTTCTGGC TGATGAGTAT TGATGCACAC TGGTATTCTA CCATGTATAG CTGGTACACA
TTCGCAAGCA GCTGGGTTTC TGGTATCGCA CTGATCATTC TGTTCCTGGT TCACCTGAAA
CGTAATGGTT ACCTGCCGAT GGTAAATGAA GAACACCTGC ATGACCTGGG TAAATTTGCT
TTCGCATTCA GTATCTTCTG GACATACCTG TGGTTCTCTC AGTATATGCT GATCTGGTAT
GCAAACATGC CTGAGGAGAT CGTCTACTTC AAACCACGTG TTTGGGGCGA GTGGAGACCC
ATCTTCTTCC TGAACCTGCT GATCAACTTC ATTACTCCAT TATTATACCT GATGAAGCGT
GATACAAAAC GTAACTACTC TTCTATGGTG TTTATCTCTG TAGTAATCCT GGTAGGTCAC
TGGTTAGATT TCTGGCAGAT GGTAGGTCCT GGTACTTACA AACACCTGGT GTTCCCTTGG
TACGAATTCG GTCTGGGTCT TGGTTTCGTT GGTGTGATTA TCTATGTGGT AATTCATCAG
CTGACGAAAG CGCCGCTGGT TCCAAAGAAT CATCCTTATC TGAAAGAAAG TATTGTACAC
CATACCTGA
 
Protein sequence
MKDQFVVPAR LKRTSFVLMG VGLLTLLIGI FAFHGEHGST RFWAGLLQNS TFFLLVVLAS 
AFFIGATTLA HGGWQIGFRR VPEAISMAVP VLGGILFVIL MLIAFTGKEN IYHWLNAEHV
KHDEILSWKS AFLNKGMFTA FSVVTIGAWS FFAVKLRKMS IEEDGWDLSA ATGRRIVWRN
TVWCGGFIVV YALTVGSTTP WFWLMSIDAH WYSTMYSWYT FASSWVSGIA LIILFLVHLK
RNGYLPMVNE EHLHDLGKFA FAFSIFWTYL WFSQYMLIWY ANMPEEIVYF KPRVWGEWRP
IFFLNLLINF ITPLLYLMKR DTKRNYSSMV FISVVILVGH WLDFWQMVGP GTYKHLVFPW
YEFGLGLGFV GVIIYVVIHQ LTKAPLVPKN HPYLKESIVH HT