Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0498 |
Symbol | |
ID | 8356604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 595941 |
End bp | 596603 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962644 |
Product | fatty acid hydroxylase |
Protein accession | YP_003120197 |
Protein GI | 256419544 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG ATAAGATTAA GAACAAGGGA CAGGCGAGAT TATTTGAAAG CAGGTATTTG GAGATGCTCA CCAAAACACA CCCCCTGGTT ATCTGGGCGA TGTACATCCC CATCATCGGT TACATGCTAT TTTACAGTTA TGACACATTA GGATTCAGTA TTACCCGTGT GGTGACTGTT TTTCTGGGTG CGATGTTTTT CTGGACTTTA TTTGAATACC TGATGCATCG CTATCTGTTC CATTTCAGTA GCGAAAACCA GCGGGTAAAG CGATTTATTT ATGTCATGCA TGGTAATCAC CATGAGTACC CGCGTGACAA ACAACGGCTG TTCATGCCGC CGGTACCCAG TCTGATCCTG GCCTCGGTTA TCTTCAGTGC GCAGTACGTT TTTCTCAGGG AGTATACTTT TATGTTTTTT CCTGGGTTCA TGCTGGGATA CCTGATTTAT GGCAGTATGC ACTATGCGAT CCATGCATGG AATCCGCCGG CGAAGTTCCT GAAACCATTA TGGCGTAACC ACCATCTGCA CCATTATAAA GGTGACGAGA AGGGCTTTGG TGTAAGTTCC AGTATATGGG ATTATATATT CGGTACCAGC TTTGATCTGG AAAAGGAAAA AGAAGACAAG GAGAAAGTGC GGGAACTGAT GTTCAATAAA TAA
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Protein sequence | MKFDKIKNKG QARLFESRYL EMLTKTHPLV IWAMYIPIIG YMLFYSYDTL GFSITRVVTV FLGAMFFWTL FEYLMHRYLF HFSSENQRVK RFIYVMHGNH HEYPRDKQRL FMPPVPSLIL ASVIFSAQYV FLREYTFMFF PGFMLGYLIY GSMHYAIHAW NPPAKFLKPL WRNHHLHHYK GDEKGFGVSS SIWDYIFGTS FDLEKEKEDK EKVRELMFNK
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