Gene Cpin_0498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0498 
Symbol 
ID8356604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp595941 
End bp596603 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID644962644 
Productfatty acid hydroxylase 
Protein accessionYP_003120197 
Protein GI256419544 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTG ATAAGATTAA GAACAAGGGA CAGGCGAGAT TATTTGAAAG CAGGTATTTG 
GAGATGCTCA CCAAAACACA CCCCCTGGTT ATCTGGGCGA TGTACATCCC CATCATCGGT
TACATGCTAT TTTACAGTTA TGACACATTA GGATTCAGTA TTACCCGTGT GGTGACTGTT
TTTCTGGGTG CGATGTTTTT CTGGACTTTA TTTGAATACC TGATGCATCG CTATCTGTTC
CATTTCAGTA GCGAAAACCA GCGGGTAAAG CGATTTATTT ATGTCATGCA TGGTAATCAC
CATGAGTACC CGCGTGACAA ACAACGGCTG TTCATGCCGC CGGTACCCAG TCTGATCCTG
GCCTCGGTTA TCTTCAGTGC GCAGTACGTT TTTCTCAGGG AGTATACTTT TATGTTTTTT
CCTGGGTTCA TGCTGGGATA CCTGATTTAT GGCAGTATGC ACTATGCGAT CCATGCATGG
AATCCGCCGG CGAAGTTCCT GAAACCATTA TGGCGTAACC ACCATCTGCA CCATTATAAA
GGTGACGAGA AGGGCTTTGG TGTAAGTTCC AGTATATGGG ATTATATATT CGGTACCAGC
TTTGATCTGG AAAAGGAAAA AGAAGACAAG GAGAAAGTGC GGGAACTGAT GTTCAATAAA
TAA
 
Protein sequence
MKFDKIKNKG QARLFESRYL EMLTKTHPLV IWAMYIPIIG YMLFYSYDTL GFSITRVVTV 
FLGAMFFWTL FEYLMHRYLF HFSSENQRVK RFIYVMHGNH HEYPRDKQRL FMPPVPSLIL
ASVIFSAQYV FLREYTFMFF PGFMLGYLIY GSMHYAIHAW NPPAKFLKPL WRNHHLHHYK
GDEKGFGVSS SIWDYIFGTS FDLEKEKEDK EKVRELMFNK