| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0462 |
|---|
| Symbol | |
|---|
| ID | 8356568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 558768 |
|---|
| End bp | 559499 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644962608 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_003120161 |
|---|
| Protein GI | 256419508 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACACA AAACCCGCGG AATAGTATTA AGAACAGTCA AATACGGCGA TACCAGTGCC
ATCGTCAATA TATTCACCGA ACTATTCGGG GTACAATCCT ATATGGTGAA CGGCGTGCGC
AGCTCCAAAC CAAAAGCCAA AGGCAATCTG TTCCAGCCGG GTAATATCCT GGAAATGGTC
GTATACCACT ATGAGCAAAA GACCATCCAG CGTATTTCTG AGTTTAAACT GGGTTATATC
TATACCTCCC TGCACTTCAA TATTGTGAAG AACACAGTAG CGCTTTATAT GATCGAGTTG
CTACAGAAAA GTCTGCGTGA ACCGGAGCAG CAGGTGGACC TATACTACTT TGCCGAACAG
GCTTTACAGG CGCTGGATAT GGCGCCACTG GGTATTGCGG CCAATATCCC GCTTTATTTC
ACCCTTAAAC TGGCGGAGCA TCTTGGTTTC CGGCTCAATG GACGTTATTC TGAATATGCC
CACTATCTCG ATCTCCAGGA AGGCTCATTT ACAGATCTGC CACCACATCA CAGTAATTAT
CTTGATGCTG CGAACAGTGA GATCACAGAT CGCCTGTTCC AGTGTAAAAG CTGGGAAGCA
TTGGACGAGA TCAACATGAA TAAAGATAAA CGCAGAAAGC TGTTATATGC TTATCTGGAT
TTCTTCAGAT TGCACCTGCC TGATTTCCAG GAATTAAATT CTCCCCCGAT CCTGCACGAA
ATCCTCGACT GA
|
|---|
| Protein sequence | MLHKTRGIVL RTVKYGDTSA IVNIFTELFG VQSYMVNGVR SSKPKAKGNL FQPGNILEMV
VYHYEQKTIQ RISEFKLGYI YTSLHFNIVK NTVALYMIEL LQKSLREPEQ QVDLYYFAEQ
ALQALDMAPL GIAANIPLYF TLKLAEHLGF RLNGRYSEYA HYLDLQEGSF TDLPPHHSNY
LDAANSEITD RLFQCKSWEA LDEINMNKDK RRKLLYAYLD FFRLHLPDFQ ELNSPPILHE
ILD
|
|---|
| |