| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0459 |
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| Symbol | |
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| ID | 8356565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 553057 |
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| End bp | 553746 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962605 |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003120158 |
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| Protein GI | 256419505 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA AATACTTAAA GGGCGCTCAC CTTTCTGAGC GTAAATTTAA GGAGATACTA
CGGCTATTTG CCGAAGATCT TACAGCCACT CAGATTGCCA ACATTAGTGG GGTAAGCCGT
GTCACTGTAA ATAGTTATCT CAAAAAGATC CGCCAGCAGA TTGCCCGTCA CTGTGAGTCT
TTATCGCCCT CCGACAATCA CAACCGTTCA GTAGCCCCCG CGCGCATCAC ACATGCTTCA
CCTGCCGAGG ATGGGGACGT ATCCGTCAAA ACAGAAGTAG GCCGTACTGT AAAGCCGGTC
GTATTTGGTA TTTACCGTTC TTCGGACCGG TTACATACGG AGATATTGCC TGATGTAAGC
AGGTCAATGA TCCATTCTGT TGTGAGGAGC AGCCGTTCTA TTCTGGAGAT GCAGGGAGCC
GCCGAGAAGA TCCGCCGTTT CAGCAATGTG GTGGACCTGG GGCAATACCG TTTGTACAAC
CTGGAAAATG AGGGCGCTAT TAGTATTGCG GACGACGTGG ACGCGTTCTG GGGGTTGACC
AAGCACAGGC TTGCCAAGTT CAAGGGATTG AACCGTAGTA CTGTGTATTT ACATTTAAAG
GAGTGCGAGT TCCGGTATAA CAACAGGAAT GAGGACATTT ATGAGACTTT GCTGGAATTG
TTAAAAAGCC AGCCGCTGAG TCTTTCCTGA
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| Protein sequence | MKNKYLKGAH LSERKFKEIL RLFAEDLTAT QIANISGVSR VTVNSYLKKI RQQIARHCES
LSPSDNHNRS VAPARITHAS PAEDGDVSVK TEVGRTVKPV VFGIYRSSDR LHTEILPDVS
RSMIHSVVRS SRSILEMQGA AEKIRRFSNV VDLGQYRLYN LENEGAISIA DDVDAFWGLT
KHRLAKFKGL NRSTVYLHLK ECEFRYNNRN EDIYETLLEL LKSQPLSLS
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