| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0454 |
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| Symbol | |
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| ID | 8356560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 539509 |
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| End bp | 542529 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962600 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003120153 |
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| Protein GI | 256419500 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0605614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA CTTTACTCCT ATGGCTATTC GTGGCCATCA GCGGGATGAC CGCGTATGCC
CAAACACGAA CGATTAAAGG CAAGGTAACT GACTCAAAAG ATGGCGCAGC CGTACCCTAT
GCTACTGTCA GGATCCAGGG GACCAACAAA GGAACTGCAA CTGATCAAAG CGGAAATTTC
AGCATCGATA TTTCCGGTAC ACAGACATTG GTTATTTCAA GTGTTGGGTT CACCTCACAA
TCCGTGAAAC CTGATAACAG TAATACGGTG AATGTATCAT TGCTGGCAGA TAATACACTT
ACCGAATACA TTGCCACCGG CTATGTAAAT ACCAACAGGG TAAGAAAGGT AAGTGCGGTC
GCTGAAGTCA CGGCGGAAAA GCTGGGAAAC ACCCCGCTCG TTGACATCAA CCAGGCTTTA
CAGGGACAAG CTGCCGGCGT ATTCGTTGGC GGTGCTTCTG GTCAGCCGGG CTCCGTACAG
AATGTACGCA TCCGTGGGGT AGGTTCCATC AGTGCCAGCG CCGCGCCGCT TTATGTAATC
GACGGAATCA TCGTGGATGG CCGTGATGTG AACAATACCG GCAACCTTGC ACTGCAATCC
AATGACCTCC TGGCCAACCT GAACCCTAAC GATGTTGAAA GCATCAATAT CCTGAAAGAT
GCATCTGCTA CAGCGATGTA CGGTTCCAGA GGCGCCAACG GCGTGATCGT TATTAATACC
AAAAAAGGAA AAGCAGGTGT TACTACTTTC GGCGCCCGTG CACAATATGG TTCGGCAAAA
CCAAGCTTTG GTAAATCCTC ACTGCTGACA CCTGCCGAAA GCTATGCCTA TAATCGCGAT
GTACTGGCAT TGAATGATTT TACACCGGCT GAAATTGATG AAGAGTTTCC TGCTTCATTA
CTGGCTACAG GCTTTAACTG GCGCGACGCC GGTTTCCGTA CCGCTAAAAT GCAGGATTAT
GGTATCTCTG CTTCCGGTGG TAACGAGAAA ACAAAATTGT ACATTTCAGC AGGTTATAAT
GACCAGGAGG GAACACTGAT CAACTCCGGT CTGAAACGAT ATACCGTCAT TTCAAACGTA
TCCCAGAAAG TAAATGACAG ACTGGATATT GCGATGAACC TGAACCTTTC ACAAGGCGAC
GCCAGCAGTG CAATGGGGGG TAACTTTTAT TCCAGTCCGC TGTTGGGCGC TTATTTCGTT
TCTCCTTTTC AAAGCCCTTA TAAAGCCGAC GGTTCACTGT ATACTGGTCT TGAATCTGAT
TTTAATGCTG CCAGTGGAGA TAACTTCCTG TACTCTGTTT ACAGAAATGA CAAGAAGTTG
TCCAACTTCC GTGGTCTTGG TGGTGCAACG GTTTCATACC GCATATTCGA CTGGCTGAAA
ATACAGGAGA GAGTCAATCT TGATATGGTG AATACAGAAG CGAATCTGTT CTATGATCCT
ACTACCGGTG ATGGCTACAA TGCCGCCGAT CCGCTGAAAA GCGGAAGTGT ATACAACCAG
AATGTAAAAG TCTCTACAGT AACCAATCAG TTTTCTCTGA GCGGTAATTT CAATATCGGT
GAAGAACATC AGCTGGATTA TCTTGCACTG ACGGAATACA ACCGTTTTAA GTCAAGATCA
TTCAGTGCTG AAGGTATTGG TATTATCGGC AGTCAGCTGA AAGTACTTGA TATTACTGCT
ACTCCGCAAA CAGTAGGTGG TAATGCTACT GAGTATACGT TCCTGTCTTA TATGGGACAA
TTGAATTATT CCTTCAGACA AAAATATAAC CTGAGTCTTG GTGTCAGAAC AGATGGTTCT
TCACGTTTCG GGGTGAATAC CCGCTATGGT ACTTTCTTCT CAGTAGGTGC TTCGTGGAGA
TTGATAGAAG AAGAATTTAT GAAATCGCAG GAGCTGTTTT CTGATCTGAA ATTACGTGTT
AGTTATGGTC AGACAGGTAA TGCGGACTTT GGCAGTATCG ACAACTTCGT AGCCCGTGCA
CTGTATGACT ATGGCACCTC ATATAACGGT GCGCCTGGTA ATGCTCCTAA CACGATTGGT
AACGTCGATC TGACATGGGA AAAGAATAAG TCTTTCAATA TAGGTCTGGA CCTCGCTTTA
CTGAAAGGCG CTATCACTGC AACGATCGAT GTATACAAAC GTAAAACAGA TGGGTTGCTG
CTCAATACAC CGGTGTCATC TACCAGTGGT TTTACTACAC AGATGACTAA CATCGGCTCA
TTAGAAAATA AGGGTATTGA AGCATTGATC TCCACTAAAA ATTTTGATAA CAGAGGTGGG
TTTAGCTGGC GTACAGAACT CAATATCGGT ATGAACAGGA ATAAGATCAC ATCGCTGTTC
ATGGGCCGTG ATGTGGCTGG TGGAAACAGT ACACAGCTGC ACAGAGTAGG TCAGCCTGTA
CAAAGCTGGT ACCTGAATGA ATGGGCCGGT GTAGATCCTG AAAATGGTGA TCCTTTGTGG
TATACTGCTG ATGGAAAAAC AACCAACAAC ATCAACCTTG CAGAAAGAAG AATTGTGGGT
AATAGTCAGC CTAAATTCAC TGGTGGACTC ACCAACACTT TTGAATACAA AGGTATCGGT
GTTTCTGTAT TCTTCTATGC TGTAACAGGT AACAAAATTC TTAACAGAAC AAGAATACTG
GGTGATGCTG ATGGTGCTTA CTTCGGATAC GGATATGATA AGCTGACTGC TGAAAATTAC
TGGCGTAAAC CTGGTGATAT TGCAGAGAGA CCTAAACCTA TTCCAGGAGG AAATAAAAAT
GCCAACTCCG CATTGTCGAC ACGGTACCTG GAAGATGGAT CTTTCCTGCG TCTCAGAAAT
ATCAGCCTGA GTTATAGTCT GCCTGCAAAA TGGGTCAGAG CTGCCAAATT CACCAGTGTA
AAACTCTATG CACAGGCGGC AAATCTTGCT ACCTGGACCA GCTATACCGG ATGGGATCCT
GAACAGGATA TCAGTGCGAT GGAATTCTTC AGATATCCAC CTTCAAAGAG CATCACTTTT
GGCGCAAACA TTAACTTCTA A
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| Protein sequence | MKHTLLLWLF VAISGMTAYA QTRTIKGKVT DSKDGAAVPY ATVRIQGTNK GTATDQSGNF
SIDISGTQTL VISSVGFTSQ SVKPDNSNTV NVSLLADNTL TEYIATGYVN TNRVRKVSAV
AEVTAEKLGN TPLVDINQAL QGQAAGVFVG GASGQPGSVQ NVRIRGVGSI SASAAPLYVI
DGIIVDGRDV NNTGNLALQS NDLLANLNPN DVESINILKD ASATAMYGSR GANGVIVINT
KKGKAGVTTF GARAQYGSAK PSFGKSSLLT PAESYAYNRD VLALNDFTPA EIDEEFPASL
LATGFNWRDA GFRTAKMQDY GISASGGNEK TKLYISAGYN DQEGTLINSG LKRYTVISNV
SQKVNDRLDI AMNLNLSQGD ASSAMGGNFY SSPLLGAYFV SPFQSPYKAD GSLYTGLESD
FNAASGDNFL YSVYRNDKKL SNFRGLGGAT VSYRIFDWLK IQERVNLDMV NTEANLFYDP
TTGDGYNAAD PLKSGSVYNQ NVKVSTVTNQ FSLSGNFNIG EEHQLDYLAL TEYNRFKSRS
FSAEGIGIIG SQLKVLDITA TPQTVGGNAT EYTFLSYMGQ LNYSFRQKYN LSLGVRTDGS
SRFGVNTRYG TFFSVGASWR LIEEEFMKSQ ELFSDLKLRV SYGQTGNADF GSIDNFVARA
LYDYGTSYNG APGNAPNTIG NVDLTWEKNK SFNIGLDLAL LKGAITATID VYKRKTDGLL
LNTPVSSTSG FTTQMTNIGS LENKGIEALI STKNFDNRGG FSWRTELNIG MNRNKITSLF
MGRDVAGGNS TQLHRVGQPV QSWYLNEWAG VDPENGDPLW YTADGKTTNN INLAERRIVG
NSQPKFTGGL TNTFEYKGIG VSVFFYAVTG NKILNRTRIL GDADGAYFGY GYDKLTAENY
WRKPGDIAER PKPIPGGNKN ANSALSTRYL EDGSFLRLRN ISLSYSLPAK WVRAAKFTSV
KLYAQAANLA TWTSYTGWDP EQDISAMEFF RYPPSKSITF GANINF
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