Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0439 |
Symbol | |
ID | 8356545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 522376 |
End bp | 523053 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644962585 |
Product | OmpA/MotB domain protein |
Protein accession | YP_003120138 |
Protein GI | 256419485 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGA TAAATCCTAT TGTAGCTATT CTCTTGTCTG CGATCACCTT ATTCGCTTGT AACACAGTGA AACAAATGGA TAACACTCAA AAAGGCGCTG CTATCGGTGT GGCTGGTGGT GCTGCAACTG GTGCAATTAT CGGTAAAGCT GCTGGTAATA CTGCATTAGG TGCGATCATT GGTGCTGCCG TAGGTGGTGG TGCTGGTGTG CTGATCGGTA AAAAAATGGA TAAACAGGCG CAGGAAATCA AAACTGAAGT TCCAAATGCA ACTGTTGAGC GTGTAGGTGA AGGTATTAAT GTAACCTTTG CTTCAGGGGT ACTGTTTGGT TTTGATAAAT CAGACCTGAC CGGACAAGCA CAGCAGAACA TTAAAGACCT GGCTACTATT CTGAACAAAT ATCCTGATAC TTACGTTCGT GTAGAAGGTC ATACTGATAC TACAGGTACA GATTCTTATA ACATGGGTCT TTCTGAAAGA CGTGCAAATG CTGTAGCTAC TTACCTGAAA TCTCAGGGTG TTGCTGCCAG CCGTGTACAG ACTTTCTGGT ATGGTGCAAG ACAGCCGGTT GTTCCTAACA ACTCTGATGC TAACAAAGCT AAAAACCGTC GTGTTGAATT CTCCATCTTC GCGAATGAGA AGATGAAATC TGACGCACAG AAAGAATCAG GTAAATAA
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Protein sequence | MKRINPIVAI LLSAITLFAC NTVKQMDNTQ KGAAIGVAGG AATGAIIGKA AGNTALGAII GAAVGGGAGV LIGKKMDKQA QEIKTEVPNA TVERVGEGIN VTFASGVLFG FDKSDLTGQA QQNIKDLATI LNKYPDTYVR VEGHTDTTGT DSYNMGLSER RANAVATYLK SQGVAASRVQ TFWYGARQPV VPNNSDANKA KNRRVEFSIF ANEKMKSDAQ KESGK
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