Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0418 |
Symbol | |
ID | 8356524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 503914 |
End bp | 504552 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644962564 |
Product | beta-lactamase domain protein |
Protein accession | YP_003120117 |
Protein GI | 256419464 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAAA TACAACATTT CACCTTTAAT CCGTTTCAGG AAAATACCTA TTTACTCATT AACGAAAAAA AGGAATGTAT AATTATAGAT CCGGGCTGTT ATTTTGAAGA AGAAAGGAAA CAATTACAGA ATTATATCGA AAAAGAGGGG CTTAAAGTTA CACGCCTGCT CAATACTCAT TGCCACATCG ACCATATCCT CGGCAATAAG CTGGTAGTTA CAACATATGG CGTAGGTCTG GAAATACACC CCCTGGATAA GATATTACTG GACCGCTCTC CTGAAATAGG GAAAATGTAT AATATTCCCT TTGACCCCTC CCCTGAACCT GTTCGTTTCC TTGAAGATGG TGAAAAGATA ACATTCGGTG ACGACGAACT GGAGGTACTG CTCACACCTG GTCATTCACC AGGCAGCGTA TGCTTTTATT CCGCCGCCGG GAAATTTGTG ATTGGTGGCG ATGTCCTGTT CTTCCAGAGC ATCGGTCGGA CCGATCTTCC CGGAGGCAGT CATCAAACTT TATTAAACAG CATACAGGAG AAATTGTTCG TATTGCCTGA TGACGTAAGG GTATATCCCG GTCATGGACA GTCCACGACT ATCGGATACG AAAAGCAGCA TAATCCCTTC CTGAAATAG
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Protein sequence | MMEIQHFTFN PFQENTYLLI NEKKECIIID PGCYFEEERK QLQNYIEKEG LKVTRLLNTH CHIDHILGNK LVVTTYGVGL EIHPLDKILL DRSPEIGKMY NIPFDPSPEP VRFLEDGEKI TFGDDELEVL LTPGHSPGSV CFYSAAGKFV IGGDVLFFQS IGRTDLPGGS HQTLLNSIQE KLFVLPDDVR VYPGHGQSTT IGYEKQHNPF LK
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