Gene Cpin_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0418 
Symbol 
ID8356524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp503914 
End bp504552 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content43% 
IMG OID644962564 
Productbeta-lactamase domain protein 
Protein accessionYP_003120117 
Protein GI256419464 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAAA TACAACATTT CACCTTTAAT CCGTTTCAGG AAAATACCTA TTTACTCATT 
AACGAAAAAA AGGAATGTAT AATTATAGAT CCGGGCTGTT ATTTTGAAGA AGAAAGGAAA
CAATTACAGA ATTATATCGA AAAAGAGGGG CTTAAAGTTA CACGCCTGCT CAATACTCAT
TGCCACATCG ACCATATCCT CGGCAATAAG CTGGTAGTTA CAACATATGG CGTAGGTCTG
GAAATACACC CCCTGGATAA GATATTACTG GACCGCTCTC CTGAAATAGG GAAAATGTAT
AATATTCCCT TTGACCCCTC CCCTGAACCT GTTCGTTTCC TTGAAGATGG TGAAAAGATA
ACATTCGGTG ACGACGAACT GGAGGTACTG CTCACACCTG GTCATTCACC AGGCAGCGTA
TGCTTTTATT CCGCCGCCGG GAAATTTGTG ATTGGTGGCG ATGTCCTGTT CTTCCAGAGC
ATCGGTCGGA CCGATCTTCC CGGAGGCAGT CATCAAACTT TATTAAACAG CATACAGGAG
AAATTGTTCG TATTGCCTGA TGACGTAAGG GTATATCCCG GTCATGGACA GTCCACGACT
ATCGGATACG AAAAGCAGCA TAATCCCTTC CTGAAATAG
 
Protein sequence
MMEIQHFTFN PFQENTYLLI NEKKECIIID PGCYFEEERK QLQNYIEKEG LKVTRLLNTH 
CHIDHILGNK LVVTTYGVGL EIHPLDKILL DRSPEIGKMY NIPFDPSPEP VRFLEDGEKI
TFGDDELEVL LTPGHSPGSV CFYSAAGKFV IGGDVLFFQS IGRTDLPGGS HQTLLNSIQE
KLFVLPDDVR VYPGHGQSTT IGYEKQHNPF LK