| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0417 |
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| Symbol | |
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| ID | 8356523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 502370 |
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| End bp | 503908 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962563 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_003120116 |
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| Protein GI | 256419463 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGTATAA AATCACTGGC AGGACAAACG ATCTATTACG GCTTTAGTAA CATTGCGAGT
AAGCTGCTTA ATTACTTTCT TACCCCCCTT TACCTGGAGC TGATGACACA GGCTTCCTAT
GGGGAGATGT CTACGGTATA TGCGTATGTG CCTTTCATGA ATATTATACT CACCTACGGG
ATGGAAACGG CTTTCTTCCG CTTTGCCAAA AAGGAGAACA GTCAGTCCGT TCTGAGTACC
TCAACCATTT CCCTGTTATT TTCAACCATC AGCTTTACCA TCATACTCCT GCTGTTCAGA
GGGACGATCA TCAATTCCTA TATCGGCGAA CTGGGCGGAC TGGGCGGACA TCCGGGATTT
TATACCTCCC TGGTACTGAT TATGGCATTT GATGCCCTGA CCGCGATTCC GTTTGCCCAA
CTACGAATGG AAAACAGACC CGTGCGTTAT GCCTTCATAC GCCTGACGGG TATTGTTACC
ACCATCGCAT TTAACGTACT GTTCCTTGTA GTGATCCCGA AATTGTATGC AGCAGGACAG
ACCTGGCTGC CTGATATAGG TCCTGGCGGT AACCAGCTGG GCTATGTGTA CCTGAGTAAT
ATGCTGGGCA GCGGGGTTAC CTTCCTGCTA TTCCTGCCAC AAATGATGCG CATCAGCTGG
AAATTTGACA AGGTATTATG GCGGCAGATG CTCAATTATT CCGTTCCGCT GATCTTTTTC
GGGATGGCGG GCATGGTCAA TGAGACGTTT GACAGGGCCT GGTTCCTGCC GGAATTCCTG
CCGGGCAACA ATATGAACGA TAAAAAAGAA CTGATCGGGA TCTATGCGGC CAACTATAAA
CTGGCGATTC TGATCACAAT GTTCATACAG GCATTTAAGT TAGGAGCGGA ACCCTTTTTC
TTCAAACAGG CCGAGGGAAA GGATCCACAG AAAATGTATG CACGTATTAT GAAGCTGTTC
GTGGTACTGC TTTGCATGAT GTTCCTGTTC GTAGGTCTGT ACCTGAACGT CTGGAAAATA
TTCCTCCGTA AACCGGAATA CTATCCTGGT ATGAGGATCG TTCCTATCTT ATTGCTGGCC
AATATGTTCC TGGGTATTTA CTACAACCTG ACCATCTGGT TCAAACTGAC CGACCGGACC
AAAACCGGGG CGATGATTAC GATCGTCACG GCAGTACTGG CCTTCCTGCT GAATTGGTGG
TGGATACCTG TTATGGGCTA CTTTGGAGCA GCCCTGGCTA CGATGGCCTG TTACTTTGTA
CAGATGGCCA TCTGTTATGT ACTCGGACAA AAATACTACC CGGTGCCTTA CCACCTCCCG
CGTATACTCA CCTACATACT GGGAGCCGTA GGCACTTTCT ACGTATATGA CCTGTTGAAC
AGGACCCTGT TCTCTCCCAA AGATATCTAT GCGCTGAGTC CATTATCACT GACGGTGGCG
ACAATTTTCT TCTGCGCCTA TCTCTGGTTC CTGCTGAAAA TGGAAAAGAA AGAGTTTTCC
AGGCTCCCGT TCATCGGCAA GTATGTAGCA AAAATCTGA
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| Protein sequence | MSIKSLAGQT IYYGFSNIAS KLLNYFLTPL YLELMTQASY GEMSTVYAYV PFMNIILTYG
METAFFRFAK KENSQSVLST STISLLFSTI SFTIILLLFR GTIINSYIGE LGGLGGHPGF
YTSLVLIMAF DALTAIPFAQ LRMENRPVRY AFIRLTGIVT TIAFNVLFLV VIPKLYAAGQ
TWLPDIGPGG NQLGYVYLSN MLGSGVTFLL FLPQMMRISW KFDKVLWRQM LNYSVPLIFF
GMAGMVNETF DRAWFLPEFL PGNNMNDKKE LIGIYAANYK LAILITMFIQ AFKLGAEPFF
FKQAEGKDPQ KMYARIMKLF VVLLCMMFLF VGLYLNVWKI FLRKPEYYPG MRIVPILLLA
NMFLGIYYNL TIWFKLTDRT KTGAMITIVT AVLAFLLNWW WIPVMGYFGA ALATMACYFV
QMAICYVLGQ KYYPVPYHLP RILTYILGAV GTFYVYDLLN RTLFSPKDIY ALSPLSLTVA
TIFFCAYLWF LLKMEKKEFS RLPFIGKYVA KI
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