| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0355 |
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| Symbol | |
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| ID | 8356460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 421761 |
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| End bp | 423662 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962501 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003120055 |
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| Protein GI | 256419402 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0973758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAT ATTTGCTGAT ACTGACAGCT GTCATCTCAA TCATAACAAC AGGATGCTTA
AAGGATGATG AATTCCTGAC GACTGATCCT ACCAATTTGC TTACTGACGA TGCAGTATGG
AAAAGCTCCG ATCTGGTGCT TTCTGTACTG GCTGATTTAT ACGACCGTTA TCCTGAACAG
CAGACCATTA CCAACTGGGC TGAGTTTACC AACTTTGATG AGGCATTTGC TTCAGAAGCT
GGTCAGTACT GGAGAACCAA ACAGGTAGAT TATCCTACCG GATGGTGGTC TTTGTGGGAT
TACGGTTATA TCCGTGACCT GAACCTGTTC GTGCAGAAAT GCCAGGCTGC TAATGAGCTG
GCTGCTGATG CACGCGCCCG TTTCCTGGCA GAAGCCCGCT TCCTGCGTGC TGCTATTTAC
TTTGAAGAAG TAAAACGTAT GGGTGGCGTT CCTTTGATCC TGGAACCAAT GGAATATAAC
TTCAGTGGTG ATCCTACTTA CCTGCAACAT GCACGTGCGA AGGAATCCGA TATATATGAT
TTCGTGATCA GTGAACTGGA TAGCGTGAAG AATGTATTGC CTGATGATGG CGGTATCAAA
TCCCGCGCAA CCAGAGCCGC CGCATTGGCG ATGCAATCAA GAGCTGCTTT ATATGCAGGT
TCCATTGCGA AGTATGGCGG ATCCACGCCG CTGGTAAGTC TGCCGGGTGG TGAAGTGGGC
ATATCTGCCG ACAAAGCAGT TGCTTATTTT ACAAAAGCAC TGGAAGCATC CCAGGCGGTG
ATTACCGGAG GTAAATATTC TTTATACAAA AAGAAAGCAG AAGACCTTCA GGAGAATTTC
GCTTCACTCT TCTATGATAA GTCAAACAAC CCGGAAGTTA TCTTCGTACA GGATTTCAAA
TTGAAGTCAG GTAAAACACA GGACTGGACG CTGGCTAACC AGCCATGGTC TTCCGCCGAG
GAACAACAGG GAGGTAGAGT AAATCCATCC CTGAACCTGG CCCTGCAATA CGAGAAACTG
GATAACACGT TCGCGCCATT CGCTACGAAT AACGGCAGTG ACTATGTGTA CTACAATAAT
CCGGGTGATA TTTTCGCTGG CAGAGATGCC CGTTTGGGTG GCACGATCAT GTTACCTGGC
AGCCGTTTCA AAGGTGTTCC ACTAGACATC TGGGCAGGCG TGATGTACTG GAAGGATGGT
AAATACAATA TTATCACTGG TGATAACTTT GGCGACAGAG ACAGTATTCC GGTTGCGGGA
TCTCCAAGGA GTTCTCAGGT AGTGGGTACA GATGGTCCGG TAGACGGGCT GCAATACAGT
GCACAGACCG GTTTTTTTGT TCGTAAGTTC ATGGATCCTA CAGTGGGTTC TGGTCAGATA
GGTACCCGTA GTGATGTATG GTGGGTACGT TTCCGCTATG CAGAAGTATT ATTAAATGCA
GCAGAAGCTG CTTTCGAACT CGGTCAACCC GGTCTTTCAT CCACTTATAT TAACCAGCTG
CGTGAGCGCG CAGGTTTTAC TACCCAGCTC ACAGACGCCC AGATGACCTT TGACAGGATC
GTACACGAAA GACGTGTGGA ACTGGCCTTT GAAGGACACG AGATGTTTGA TAACAAACGT
TGGAGGATCG CACATAAAGT ATGGAACGGG GAAAATATCT CTGCTGCTGA TGTGACGAGC
AATCTTGGTA AAGCTGACAG GGTAAACACC ATGATCTATG CGATGTGGGG GTATAAAATC
TATAATCCGG GTAATGCAAA TGACGGTAAA TGGGTGTACA GAATTGTAAA ACCGTCCAAT
GTAACTGCCG CACACCGCTT TAACCTGGGG AACTACTATT CTGTGATAGG CTCAGATATC
CTTAGTAATA ACCCTAAGCT GGTGAAGAAT CCTAATCATT AA
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| Protein sequence | MKKYLLILTA VISIITTGCL KDDEFLTTDP TNLLTDDAVW KSSDLVLSVL ADLYDRYPEQ
QTITNWAEFT NFDEAFASEA GQYWRTKQVD YPTGWWSLWD YGYIRDLNLF VQKCQAANEL
AADARARFLA EARFLRAAIY FEEVKRMGGV PLILEPMEYN FSGDPTYLQH ARAKESDIYD
FVISELDSVK NVLPDDGGIK SRATRAAALA MQSRAALYAG SIAKYGGSTP LVSLPGGEVG
ISADKAVAYF TKALEASQAV ITGGKYSLYK KKAEDLQENF ASLFYDKSNN PEVIFVQDFK
LKSGKTQDWT LANQPWSSAE EQQGGRVNPS LNLALQYEKL DNTFAPFATN NGSDYVYYNN
PGDIFAGRDA RLGGTIMLPG SRFKGVPLDI WAGVMYWKDG KYNIITGDNF GDRDSIPVAG
SPRSSQVVGT DGPVDGLQYS AQTGFFVRKF MDPTVGSGQI GTRSDVWWVR FRYAEVLLNA
AEAAFELGQP GLSSTYINQL RERAGFTTQL TDAQMTFDRI VHERRVELAF EGHEMFDNKR
WRIAHKVWNG ENISAADVTS NLGKADRVNT MIYAMWGYKI YNPGNANDGK WVYRIVKPSN
VTAAHRFNLG NYYSVIGSDI LSNNPKLVKN PNH
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