Gene Cpin_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0330 
Symbol 
ID8356435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp387715 
End bp388194 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content46% 
IMG OID644962476 
Producthypothetical protein 
Protein accessionYP_003120030 
Protein GI256419377 
COG category[S] Function unknown 
COG ID[COG4430] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGA AAGTAACTTT TGATGCCGTG ATACGACAAC ATGGTGGTAT GAATGCCGGC 
TATGTCGTGT TTCCTTATAA CGTACAGGAA TTGTTTGGCG TAAAAGGCCA GGTAAAGGTG
AAAGCACTGA TTGATGGTAA AGTGACCTAT CGGGGCAGCC TGACAAAGAT GAACATGCCG
GAGCACTGGC TGGGCATTAC CCAGACAATC CGGCAACAAC TAGGTAAAGA ACTCGGCGAT
ACCATCCACG TCGAACTGGA ACAGGACCTG GAAGTCAGGG AAGTACCACT CACAGCCGAA
GTAGTCGCTT TATTTGCCAA ACACCCTAAA GCGGAAGCCT TTTATACTAA ACTGTCTTAC
ACCGACAGGA AGGAATATAT GGTGTGGATC ACCTCTGCTA AAAGAGAGGA GACCAAACAA
AACCGTCTTA AAAGCATGAT CGAAAAGCTG GAAGCAGGAA AGAAGGTGAC CGAGAAATAA
 
Protein sequence
MSRKVTFDAV IRQHGGMNAG YVVFPYNVQE LFGVKGQVKV KALIDGKVTY RGSLTKMNMP 
EHWLGITQTI RQQLGKELGD TIHVELEQDL EVREVPLTAE VVALFAKHPK AEAFYTKLSY
TDRKEYMVWI TSAKREETKQ NRLKSMIEKL EAGKKVTEK