Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0301 |
Symbol | |
ID | 8356406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 347322 |
End bp | 348290 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962447 |
Product | beta-lactamase domain protein |
Protein accession | YP_003120001 |
Protein GI | 256419348 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTC TGCGAACATT TTCCCTGAGA GGAGTATTGG CATTATTACT ACTGAGCGGC ATATTATCTG CGAAAGCACA AATAGCCGGT TCACCGGCGC AACCGGGATA TTACAGTATG CAGTTGGGAG ATTTCCGTGT CATAGCGCTT TCAGACGGTA CCATTCCCCT GAATATGCAT ACCATGTTAC ATGAAACAAA GAAGGGGGAG ATTAATACAT TACTGCAACA ACACTATCTT GATACGGTAG TGGAAACCTC TATTACCGCC TATCTTATTA TGAAGGGTGA TCAGCAGATC CTGGTAGATG CCGGTTCTGG TAGTTTCCTG GGGCCAACAC TGGGTAAACT GTCATCCAGG CTCGCAGCCA TCAACGTAAA GGCGGAAGAC ATTGATGCGG TATTACTGAC GCATCTGCAT GGAGACCATG TCGGCGGATT GATCAATGAA GGTAAAGTTG TCTTTCCGAA TGCGACACTT TATATCAGCA AACCGGAGGC GGATTTCTGG TTGACAGCAG CGAATAAAGC GACTGCCAAT AAAAGAGCGC AACCGTTCTT TGATCTTGCC CAGATGACGA TTCAGCCTTA TCAGCAGGCA GGTAAAGTAA AGACTTTTGT GCCGGGTCCA CAGTTATTAC CCGGTATTTC AGCGATGCCC GCTGTAGGAC ATACGCCAGG ACATAGTTTT TTTGCACTGG AAAGTAAGGG ACAAAAACTG GTTTTCTGGG GAGATGTGAT TCATGCCGGT GCGATACAGT TTGCGGATCC TGGGGTAACG ATTGACTTTG ACGTAGACCT GGTGGAAGCT GCGGCTATCA GAAAGCAGAC TTTTGACGAT GCTGTGAAAC AGGGATACTG GATTGCGGCG CCACATTTAT CATTTCCTGG TATCGGTCAT CTGAGATATG TTGGGAAGGA GTATGAGTGG ATACCGGTGA ATTATGCGGA GATATTTGCG GGTAAGTAA
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Protein sequence | MNFLRTFSLR GVLALLLLSG ILSAKAQIAG SPAQPGYYSM QLGDFRVIAL SDGTIPLNMH TMLHETKKGE INTLLQQHYL DTVVETSITA YLIMKGDQQI LVDAGSGSFL GPTLGKLSSR LAAINVKAED IDAVLLTHLH GDHVGGLINE GKVVFPNATL YISKPEADFW LTAANKATAN KRAQPFFDLA QMTIQPYQQA GKVKTFVPGP QLLPGISAMP AVGHTPGHSF FALESKGQKL VFWGDVIHAG AIQFADPGVT IDFDVDLVEA AAIRKQTFDD AVKQGYWIAA PHLSFPGIGH LRYVGKEYEW IPVNYAEIFA GK
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