Gene Cpin_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0301 
Symbol 
ID8356406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp347322 
End bp348290 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content47% 
IMG OID644962447 
Productbeta-lactamase domain protein 
Protein accessionYP_003120001 
Protein GI256419348 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTTC TGCGAACATT TTCCCTGAGA GGAGTATTGG CATTATTACT ACTGAGCGGC 
ATATTATCTG CGAAAGCACA AATAGCCGGT TCACCGGCGC AACCGGGATA TTACAGTATG
CAGTTGGGAG ATTTCCGTGT CATAGCGCTT TCAGACGGTA CCATTCCCCT GAATATGCAT
ACCATGTTAC ATGAAACAAA GAAGGGGGAG ATTAATACAT TACTGCAACA ACACTATCTT
GATACGGTAG TGGAAACCTC TATTACCGCC TATCTTATTA TGAAGGGTGA TCAGCAGATC
CTGGTAGATG CCGGTTCTGG TAGTTTCCTG GGGCCAACAC TGGGTAAACT GTCATCCAGG
CTCGCAGCCA TCAACGTAAA GGCGGAAGAC ATTGATGCGG TATTACTGAC GCATCTGCAT
GGAGACCATG TCGGCGGATT GATCAATGAA GGTAAAGTTG TCTTTCCGAA TGCGACACTT
TATATCAGCA AACCGGAGGC GGATTTCTGG TTGACAGCAG CGAATAAAGC GACTGCCAAT
AAAAGAGCGC AACCGTTCTT TGATCTTGCC CAGATGACGA TTCAGCCTTA TCAGCAGGCA
GGTAAAGTAA AGACTTTTGT GCCGGGTCCA CAGTTATTAC CCGGTATTTC AGCGATGCCC
GCTGTAGGAC ATACGCCAGG ACATAGTTTT TTTGCACTGG AAAGTAAGGG ACAAAAACTG
GTTTTCTGGG GAGATGTGAT TCATGCCGGT GCGATACAGT TTGCGGATCC TGGGGTAACG
ATTGACTTTG ACGTAGACCT GGTGGAAGCT GCGGCTATCA GAAAGCAGAC TTTTGACGAT
GCTGTGAAAC AGGGATACTG GATTGCGGCG CCACATTTAT CATTTCCTGG TATCGGTCAT
CTGAGATATG TTGGGAAGGA GTATGAGTGG ATACCGGTGA ATTATGCGGA GATATTTGCG
GGTAAGTAA
 
Protein sequence
MNFLRTFSLR GVLALLLLSG ILSAKAQIAG SPAQPGYYSM QLGDFRVIAL SDGTIPLNMH 
TMLHETKKGE INTLLQQHYL DTVVETSITA YLIMKGDQQI LVDAGSGSFL GPTLGKLSSR
LAAINVKAED IDAVLLTHLH GDHVGGLINE GKVVFPNATL YISKPEADFW LTAANKATAN
KRAQPFFDLA QMTIQPYQQA GKVKTFVPGP QLLPGISAMP AVGHTPGHSF FALESKGQKL
VFWGDVIHAG AIQFADPGVT IDFDVDLVEA AAIRKQTFDD AVKQGYWIAA PHLSFPGIGH
LRYVGKEYEW IPVNYAEIFA GK