Gene Cpin_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0300 
Symbol 
ID8356405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp345851 
End bp346855 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content45% 
IMG OID644962446 
Producthypothetical protein 
Protein accessionYP_003120000 
Protein GI256419347 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTAT TTATGAAACG AATTTTCTTT TTTACATTTT CATTGTTGGC GTCCGCTGCT 
TTTGCGCAGG AGAACTCATT TCCGGACAAC GGGTCTGTTG GTATCGGAAC CAACGGCGCT
GCTCCCATTG AGAAATTACA TATTAATAAC GGTAACATTT TTCTGAATAG TGGTAGTCAG
ATAAATGGTG TCGGTTACAA CTATTTTTAC CACGCCGGTC ATAACCTGGT GGTAGGTAGC
CGTCCAGGGC TTTATACACA TAACGCCCTG ATGTTACGTC CGGGAGGCTC AACCAGTGGG
GCACTTAATT CGACGTTCCA AATGTTTCTC ACACCACAGC CAAACGTTTA CACATTGAGA
GTCCAGCTAA GGGCAGATGG TTTGTCTTTT CTGAATGGCG GTAACGTCGG TATTAATACA
GAGACGCCTA CTGCGCGTCT TGAAGTCAAT GGTCAAACGA TGGTCAGTGG TGGTAGTAAT
CTGATATTGA AAGCACCGGA TGCCGCACCA GGTGATCCGG GTGATGTGTT TTTTGCGGAT
AACACAGGCA ACGAGCTTGC CAGAGTGTAT CTAAACCCAG GTACTGGTGA CCTGCGATTT
TCCGTAGGGG CGACCGTATC TGCTAAAATG ATGATTTTAA AGAATGGTAA TGTCGGTATT
GGCGCCACAC CAAAGGATGA TTATAAGCTG GCTGTAGGCG GTACTATCGC CGCCAGAAAG
ATGAAGGTGA CTTCGGAAAC CTGGGCGGAT TTTGTTTTCC AGCCGGAATA TAAATTGCCG
ACTTTGTACG AAGTGGAAAA CTATATTAAA ATGCATCAGC ATTTACCGGA TGTGCCTTCA
GCTGCAGAGG TAGAGAAAGA TGGTATCGAT GTGGGGGAAA TGAATAAAAA GCTGTTGCAG
AAGATAGAGG AAATGACCTT GTATCTGATT GAAATGAAGA AAGAGATCGG TGAGTTGAAG
GAGAAAAATA AGCAGTTGGA GACGGTGGTA CGGAGTGGTA AATAA
 
Protein sequence
MPLFMKRIFF FTFSLLASAA FAQENSFPDN GSVGIGTNGA APIEKLHINN GNIFLNSGSQ 
INGVGYNYFY HAGHNLVVGS RPGLYTHNAL MLRPGGSTSG ALNSTFQMFL TPQPNVYTLR
VQLRADGLSF LNGGNVGINT ETPTARLEVN GQTMVSGGSN LILKAPDAAP GDPGDVFFAD
NTGNELARVY LNPGTGDLRF SVGATVSAKM MILKNGNVGI GATPKDDYKL AVGGTIAARK
MKVTSETWAD FVFQPEYKLP TLYEVENYIK MHQHLPDVPS AAEVEKDGID VGEMNKKLLQ
KIEEMTLYLI EMKKEIGELK EKNKQLETVV RSGK