Gene Cpin_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0252 
Symbol 
ID8356357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp303073 
End bp303429 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content42% 
IMG OID644962399 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003119953 
Protein GI256419300 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACTA AGGATCGCAT TTGTAATGAC TTTAACGATT GTCCGATAAC GGCAACAATG 
GAAGTAATCG GTGGAAAATG GAAGCCCGTA ATTTTGTATA ATCTTCTTTC GGGTACGCGG
CGCTTTGGTG AAATCGCCAT TCGTATTCCT TCCATTTCAA GAAAAGTGCT TACCGAACAA
TTGAAGGAGC TGGAAAGGGA TGGTTTGGTC ATACGCAAAC AATACCAGGA AATCCCTCCC
CGCGTTGAAT ATTCATTGAC GGATAAGAGC AAAAGCCTTA CATCCGTTTT TAAGGAGATT
GCTGATTGGG GGAATGAAAA CCTGTTGTCA AAGCCGGCTC TGGATAATAA ACTATAA
 
Protein sequence
MVTKDRICND FNDCPITATM EVIGGKWKPV ILYNLLSGTR RFGEIAIRIP SISRKVLTEQ 
LKELERDGLV IRKQYQEIPP RVEYSLTDKS KSLTSVFKEI ADWGNENLLS KPALDNKL