Gene Cpin_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0237 
Symbol 
ID8356341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp286350 
End bp287357 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content47% 
IMG OID644962383 
Productprotein of unknown function DUF81 
Protein accessionYP_003119938 
Protein GI256419285 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCACA ACGAGGAGAT AGACCAACTT GAAAAAAAGT ATGCTACCGT GGAACGTCAG 
GAATTGTTAA TAGACCTTGT CAATGAGGAA AACCGTCACC GCCCGTTCTT ATGGCTGTTG
ATAGGTCTTA TTGCGGTGGC TGTATTAGCA GGAATAGGCG TTTTGACCTA CTATGGCACT
TCAGCGGCCA CGCATACGCG CGTTTACGAG TTTACGCAGT CTCTTTTTAC CAGGGAACTG
TTGTTCTATA TCCTGGTAGG TCTGGCGGCG CAGACCGTGG ATGGAGCGTT GGGTATGGCT
TATGGCGCGA CCTCGTCTTC TTTACTGCTA GGGCTGGGCA TTCCTCCTTC TGTTGCCAGC
GCAAGTGTAC ACGTAGCAGA GGTATTTACT ACAGGCGCTT CCGGAATATC GCATTTCCGT
TTCGGGAATG TGAATAAGAA GTTGTTTCTG TATCTGCTGG TACCAGGTAT TATCGGGTCT
ATTGCCGGGT CTTTCCTGAT CTCCAATATG AATGCGATTT CTTCCGCAGT ACCTTTCCTT
TCCTATTTCA CGGAAGAGAA TGTAAAACCT TTTATCAGCG CTTATCTGCT GATATTAGGT
GCGATTGTAC TGAGAAAAGC GTTTTTACCT AAAAAAGCAA AAAGCAAGAC CAAACGTCTG
GGATCACTGG CGTTTTTTGG CGGCTTTATG GATTCTTTCG GTGGTGGCGG ATGGGGTCCG
ATTGTAACGT CTACCTTGCT GAGCAAGGGA CGTTCGGCGC ACTACACGAT CGGTTCGGTA
AATGCAGCTG AATTTTTCAT ATCACTTTCC AGTGCAGGTA CATTTCTTAT CTTTGGGGCA
ATTGCCGGCT GGCCGGTTAT CATTGGTCTG ATTATCGGTG GTGTGATAGC CTCTCCGTTT
GCGGCGGTGC TGGTGAGAAA GATCAAGCGT AAACCGTTGA TGATCATGGT AGGAACACTG
ATCATCCTGT TGAGTCTCCG CACGATTATC ATTACACTCT TACACTAA
 
Protein sequence
MSHNEEIDQL EKKYATVERQ ELLIDLVNEE NRHRPFLWLL IGLIAVAVLA GIGVLTYYGT 
SAATHTRVYE FTQSLFTREL LFYILVGLAA QTVDGALGMA YGATSSSLLL GLGIPPSVAS
ASVHVAEVFT TGASGISHFR FGNVNKKLFL YLLVPGIIGS IAGSFLISNM NAISSAVPFL
SYFTEENVKP FISAYLLILG AIVLRKAFLP KKAKSKTKRL GSLAFFGGFM DSFGGGGWGP
IVTSTLLSKG RSAHYTIGSV NAAEFFISLS SAGTFLIFGA IAGWPVIIGL IIGGVIASPF
AAVLVRKIKR KPLMIMVGTL IILLSLRTII ITLLH