Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0237 |
Symbol | |
ID | 8356341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 286350 |
End bp | 287357 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644962383 |
Product | protein of unknown function DUF81 |
Protein accession | YP_003119938 |
Protein GI | 256419285 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACA ACGAGGAGAT AGACCAACTT GAAAAAAAGT ATGCTACCGT GGAACGTCAG GAATTGTTAA TAGACCTTGT CAATGAGGAA AACCGTCACC GCCCGTTCTT ATGGCTGTTG ATAGGTCTTA TTGCGGTGGC TGTATTAGCA GGAATAGGCG TTTTGACCTA CTATGGCACT TCAGCGGCCA CGCATACGCG CGTTTACGAG TTTACGCAGT CTCTTTTTAC CAGGGAACTG TTGTTCTATA TCCTGGTAGG TCTGGCGGCG CAGACCGTGG ATGGAGCGTT GGGTATGGCT TATGGCGCGA CCTCGTCTTC TTTACTGCTA GGGCTGGGCA TTCCTCCTTC TGTTGCCAGC GCAAGTGTAC ACGTAGCAGA GGTATTTACT ACAGGCGCTT CCGGAATATC GCATTTCCGT TTCGGGAATG TGAATAAGAA GTTGTTTCTG TATCTGCTGG TACCAGGTAT TATCGGGTCT ATTGCCGGGT CTTTCCTGAT CTCCAATATG AATGCGATTT CTTCCGCAGT ACCTTTCCTT TCCTATTTCA CGGAAGAGAA TGTAAAACCT TTTATCAGCG CTTATCTGCT GATATTAGGT GCGATTGTAC TGAGAAAAGC GTTTTTACCT AAAAAAGCAA AAAGCAAGAC CAAACGTCTG GGATCACTGG CGTTTTTTGG CGGCTTTATG GATTCTTTCG GTGGTGGCGG ATGGGGTCCG ATTGTAACGT CTACCTTGCT GAGCAAGGGA CGTTCGGCGC ACTACACGAT CGGTTCGGTA AATGCAGCTG AATTTTTCAT ATCACTTTCC AGTGCAGGTA CATTTCTTAT CTTTGGGGCA ATTGCCGGCT GGCCGGTTAT CATTGGTCTG ATTATCGGTG GTGTGATAGC CTCTCCGTTT GCGGCGGTGC TGGTGAGAAA GATCAAGCGT AAACCGTTGA TGATCATGGT AGGAACACTG ATCATCCTGT TGAGTCTCCG CACGATTATC ATTACACTCT TACACTAA
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Protein sequence | MSHNEEIDQL EKKYATVERQ ELLIDLVNEE NRHRPFLWLL IGLIAVAVLA GIGVLTYYGT SAATHTRVYE FTQSLFTREL LFYILVGLAA QTVDGALGMA YGATSSSLLL GLGIPPSVAS ASVHVAEVFT TGASGISHFR FGNVNKKLFL YLLVPGIIGS IAGSFLISNM NAISSAVPFL SYFTEENVKP FISAYLLILG AIVLRKAFLP KKAKSKTKRL GSLAFFGGFM DSFGGGGWGP IVTSTLLSKG RSAHYTIGSV NAAEFFISLS SAGTFLIFGA IAGWPVIIGL IIGGVIASPF AAVLVRKIKR KPLMIMVGTL IILLSLRTII ITLLH
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