| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0236 |
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| Symbol | |
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| ID | 8356340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 283268 |
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| End bp | 286144 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644962382 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003119937 |
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| Protein GI | 256419284 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAA AAAGACGCAC TATTCGTATT GCATACCTAT GGCTGTTCGT GTTATTAATG
CCTGTACTGG CCCAGGCACA GCTGAACGGC TCTTATATCC TTGGTGGCAA GATTGCCGGT
GACAAAGGGG AACCTTTGCC AGGCGCTACT GTTCAGATCA AGGGTACTTC CTTCGGCGCT
ACAACCGACA GTACCGGACG GTTTGAAATA ACTGCCAATA CCAGATTTCC TCTTAAACTG
CAGATCCGCC TCCTGGGCTA TCAGCCGCAG GAATTTGATG TAAAAAACAG CAATAGCCGT
TTACAGATAC AGCTGGTGAC CCAGTCTCTC CTGGTAAATG AAGTCGTGGT ATCAGCTTCC
CGTCAACAGG AAAAATTACT GAAATCGCCT GTCGCCATCG AAAAACTAGA CGTAAGAGCC
CTGAAGGAAA CTCCGGCAGC CTCTTTCTAT GACGCGATCG GTAACCTGAA AGGGGTTCAG
ATGACCACTG CAGGTCTGAC CTTTAAAGTC TTTAATACAC GTGGTTTTAA TGTACCTAAT
AACTTCCGTT TCATGCAGCT GATCGATGGG GTGGACAACC AGGCTGCTAC GCTGGGTGTA
CCATTGGGTA ATGCTATCGG GCCCACAGAA CTGGATATAC AGAGCATTGA GGTAACACCT
GGTGCATCTT CTGCCCTCTA TGGTATGAAT GCGCTGAACG GTATGTCCAA CCTGATTACC
AAAAATCCTT TCCAGTATCA GGGTATCAGC GTGTACCAGA AAGTAGCAGT CAACCATTTT
GACGGCAAAG GCAGTTCTCC GAAGCCGATC ACTGAAAGCT CTTTCCGTTA TGCACAGGCC
CTGAGTAAGA AATTCGCATT CAAAGTGAAC TTCTCTTACA TGGAAGGTAC TGACTGGTAT
GCAGACAGTC ACAATGACTT CAACCCTGGC ACTAAAGCCA ATCCGGACTT CCCGCAACTG
GTAGGTGCTG ACAATACAGC CAATGATGCC TGGAATAAAT ATGCAGACCA GAGCACATTC
CCGATCACTG ATAAAAATGG TAAATCCTAT AACGTATCGC GTACAGGTTA CTGGGAAAAA
GACCTGGTGG GTGATTATAA GGTAAAGAAC ATCAAATTTG ATGGTGCGCT GCATTACAAG
ATCACGCCAA AGATTGAGGC GTCCTATACC TACCGTATTG GTAAAATGGA TGGTTTCTTT
CAGCGTGGTA ACCGTATCGG TCTGAAAAAT GTAGTCGTAC AGAATCATAA AGTGGAATTA
GTAGGAGAAG ACTTCACTTT CCGTTCTTAT ATGTCCCTGG AAAACACCGG TGATTCATAC
AATATGAACC CACTGGCAGA TAACCTGGAA AAATCTTTCA AGACAGATAA ACAATGGCAG
GCTGACTACA AAAATGCGCT GAATGCAGCA CTCGACGCGA CTGGCAGTAA TGTAGCTGAA
GCTCACAGAG CAGCGCGTGC TGCTGCTGAT AAAGGTCGCT GGACACCTGG TACTGCAGCT
TTTGATGCAC AGTTAGCGAA GATCAAGGGC ATCAATGACT GGGATATTTA CCCGGTATCA
AAAGACAGTA CCAACAAAAG CGGTGGCGCT GCTTTATTGC AGATGAGCCA TTTCTATCAT
GCAGAAGGTA CCTGGAACCT GCGTAAATAT GTGCATTTCA TGGATGTATT GGTAGGCGCA
GACTATCGTA CTTATGAGAT CATTCCTGAT GGTAATAACT TTGTTGATCT CACCAAACCA
CTGGATAAAC GTAATACACC TGGTGGCAAA AACATCTGGT ATGGTAAAGT GGGTGGTTTC
GTACAGGGCA GCAAGTTATT CCTACATGAT CAGCTGAAAG TAACGGCTTC TCTTCGTTAC
GATAAAAGCC AGGAATTCTC CGGTAAATTT AATCCCCGTA TAGCTGCGGT GTATACTACG
CAAAACCAGC GTCATAACTT CCGCGCTTCC TGGCAGAACG GTTTCCGCTT CCCTTCTCTA
TTTGAGGCTT ATTCCTTCGT GAACAACGGT GGGGTGAGAC GTGTCGGCGG ACTGGCATTC
ATTGAGGAAG GACTGGGATA TTTCAAGAAT TCCTATCTGA CTTCCAGTGC TACTGCCTTT
ACGACTGCCG TAAATAAGGC AACCAATGCC GATCCTACCC TGAGCCGTGC GGATGCAGAA
GTACAGAATG CCAAAGTGCT GAAAGTAGCG AATCTTGATC CTATCAAACC GGAGCAGATC
CAGTCATTCG AAGTAGGTTA TAAAAGCGTA CTGTTTGATA ACAAGGTATT TGTAGATATC
GACGGTTATT TCAATACTTA CAATCACTTC ATCGGACAGG TGGAAGTAGC AGTTCCTCAA
ACAGGCAATG TCAGTAATCC GACGCAGGAA GTACTCAATC AGATGTATGA TAAACAGTTC
CAGAACCGTT ACAGGGTATG GACGAACAGT AAATCCACTG TACAGAACTA TGGTTTCGCT
GTGGGTGTAA CTTATAACTT CCTGAAGAGC TTTACCATCA GCGGTAACGC CAACTACAAT
ACCCTGGCGC AGGATAAGAC CAAAGACGAT GCATTGATCC CTGGTTTCAA TACGCCGAAA
TGGTTTACAA ATGTCAGCTT CGGTAACAGA CAGGTAGCAC GTAACCTGGG TTTCAACGTA
GTATGGCACT GGCAGGATAA GTTCTACTGG CAGAACCTGT TTGGTAACGG CGATGTGCCG
GCTTACAGCA CGGTGGATGC ACAGGTGACC TACGGCTTAC CTAAACTGCA TACATCTGTA
AAAGTGGGTG GATCCAATAT CTTCAATACT TCTTACTTCC AGTATGTAGG TGGCCCGACC
ATCAAAGGCC TCTATTATGT AGCCATCACC TACGATCTGC CTTTCAAGAA GAAATAA
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| Protein sequence | MSAKRRTIRI AYLWLFVLLM PVLAQAQLNG SYILGGKIAG DKGEPLPGAT VQIKGTSFGA
TTDSTGRFEI TANTRFPLKL QIRLLGYQPQ EFDVKNSNSR LQIQLVTQSL LVNEVVVSAS
RQQEKLLKSP VAIEKLDVRA LKETPAASFY DAIGNLKGVQ MTTAGLTFKV FNTRGFNVPN
NFRFMQLIDG VDNQAATLGV PLGNAIGPTE LDIQSIEVTP GASSALYGMN ALNGMSNLIT
KNPFQYQGIS VYQKVAVNHF DGKGSSPKPI TESSFRYAQA LSKKFAFKVN FSYMEGTDWY
ADSHNDFNPG TKANPDFPQL VGADNTANDA WNKYADQSTF PITDKNGKSY NVSRTGYWEK
DLVGDYKVKN IKFDGALHYK ITPKIEASYT YRIGKMDGFF QRGNRIGLKN VVVQNHKVEL
VGEDFTFRSY MSLENTGDSY NMNPLADNLE KSFKTDKQWQ ADYKNALNAA LDATGSNVAE
AHRAARAAAD KGRWTPGTAA FDAQLAKIKG INDWDIYPVS KDSTNKSGGA ALLQMSHFYH
AEGTWNLRKY VHFMDVLVGA DYRTYEIIPD GNNFVDLTKP LDKRNTPGGK NIWYGKVGGF
VQGSKLFLHD QLKVTASLRY DKSQEFSGKF NPRIAAVYTT QNQRHNFRAS WQNGFRFPSL
FEAYSFVNNG GVRRVGGLAF IEEGLGYFKN SYLTSSATAF TTAVNKATNA DPTLSRADAE
VQNAKVLKVA NLDPIKPEQI QSFEVGYKSV LFDNKVFVDI DGYFNTYNHF IGQVEVAVPQ
TGNVSNPTQE VLNQMYDKQF QNRYRVWTNS KSTVQNYGFA VGVTYNFLKS FTISGNANYN
TLAQDKTKDD ALIPGFNTPK WFTNVSFGNR QVARNLGFNV VWHWQDKFYW QNLFGNGDVP
AYSTVDAQVT YGLPKLHTSV KVGGSNIFNT SYFQYVGGPT IKGLYYVAIT YDLPFKKK
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