| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0197 |
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| Symbol | |
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| ID | 8356297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 244557 |
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| End bp | 246608 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644962340 |
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| Product | oligopeptide transporter, OPT family |
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| Protein accession | YP_003119899 |
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| Protein GI | 256419246 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA AATTCAAGCC TTTCGTATCG CCCGAGGTGA ATATGAAGGA ATTTACCATC
AAGTCCATTG TACTGGGCTG TATTTTCGGG ATCATCTTTG GCGCCGCAAC TGTATACCTC
GCACTGAAAG CAGGTTTGAC CGTTTCTGCA TCTATACCTA TCGCAGTTAT TGCCATTACA
CTTGGCCGCA GATTTTTCAA AACCACTATC CTGGAAAATA ACATCATCCA GACCACTGGT
TCTGCCGGTG AATCCATCGC TGCCGGTGTG GTATTCACCC TGCCAGGCTT CCTGTTCCTG
ACAGATGGTG GTGGCGAACA GTTCTTTAAT TACATGACCA TCCTGATCCT GGCCATCTTC
GGCGGTATCC TGGGTACCCT CATGATGATT CCGCTGCGTC GCTCCCTGAT CGTAAAAGAG
CATGAAACTC TCCCTTATCC GGAAGGTACT GCCTGTGGAG AGGTATTGAT CGCAGGTGAG
AAAGGTGGTG ATTTTGCAAA AACAGCATTC TATGGATTAG GCTTTGCATT TATATATGCC
ATTCTTCAGA AGGTCATGCA CATTGTGGCA GAAGTGCCTT TCTACATGAC CAAACAAGTC
AATAAATACT TCCCTTCTGC CCGCATCAGT GGTGAGATCA CCCCTGAATA TATGGGTGTG
GGCTATATCA TCGGTCCCCG TATCGCGGGT GTACTGGTAG CCGGTGGCGT ACTGTCCTGG
CTGGCACTGA TTCCTTTACT GTCATCACTG GTACCGGCAG ATATGATCGC CGCACAGCTG
GTAAAACTTG GCTACCTGGC CAGTGTAACC ACACCAGGTG GTAAAGGTAA CTGGGATCCT
AGCCTGCATA CTTTCGGTGA TTTCTCCTCC GCTGTATACT TTGCCTATGT ACGCCAGATC
GGCGCCGGTG CAGTAGCAGC TGGTGGCTTT ATCACCCTGA TCAAGACGAT TCCGACCATC
ATATCCTCTT TTAAAGGCAG CATCGGCTCC TTTAAAAAAG AAGGTACCGG AGAAGCTGGT
ATAGCAAATG GTGCTGTTCC GCGTACAGAA AGAGACCTGA ATGTAAAGAT TGTATTGATC
GGTAGCATTG CGCTGATCGT ATTAATGGCC TTCCTCCCTC AGTTACCAGG CGATTCCATT
GGCAAGAAAC TGCTGGTAGG TTTGCTGGTG GTGATCTTCG GCGCCTTCTT CGTAACAGTA
TCCAGCCGTA TCGTAGGGTT GATCGGTTCC TCCAACAACC CGATCTCCGG TATGACCATC
GCTACCCTGA TGGGTACCTG TCTGGTATTT ATCGCAGTAG GATGGAGCGG TAAAGTATAT
GAGCCAATGG CACTGGTAGT AGGTGGTATG ATCTGTATCG CTGCTGCGAA TGCCGGTGGT
ACTTCTCAGG ACCTGAAATC AGGCTATATC GTAGGTGCAA CGCCTATGTA TCAGCAGCTG
GCCCTGTTCA TTGGTGCGAT TGTTTCTTCG ATCGTAATCG GTCTGACGGT AAAATTCCTG
GATAAACCAA CGGCTGCGAT GATCGCTAAT GGCGTTACTG ACCACGCAAT CGGCAGTACT
TATTATCCTG CACCACAGGG AACCCTGATG GCCACCCTGG CAAAAGGTAT CCTTTCTTAC
AACCTCGACT GGCAGTTTGT ACTGGTAGGC GTATTCCTGG CTATCACCAT GGAACTCTGC
GGTATCAAAT CCCTGTCTTT TGCAGTAGGT GCTTATCTGC CATTATCAAC CACACTGCCT
ATCTTCATTG GTGGCGCGAT TCGTGGACTG GTAGATAAAA AGCGTAAGAA AGATAATATC
CAGGTATCTG CTGAGGAAGA AGAACTGGGT AAAGGTAACC TCTTCGCAAC CGGTCTGGTA
GCAGGTGGCG CCGTTGCAGG TGTGATCATC GCAATACTCG CCGGCTTCGA CGGCTCAGCA
AGTGTGCTGG CCAGCATTAA CCTGGAAGAG AAGCTTTCAC ATACGCTCGG AACGGGTGGT
TACTTCATTC TCGGCACTGT TGCCTTTGCA CTGATGGGAA CTTATCTCTA CCGTGTAGCT
GTTAAAAAAT AA
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| Protein sequence | MADKFKPFVS PEVNMKEFTI KSIVLGCIFG IIFGAATVYL ALKAGLTVSA SIPIAVIAIT
LGRRFFKTTI LENNIIQTTG SAGESIAAGV VFTLPGFLFL TDGGGEQFFN YMTILILAIF
GGILGTLMMI PLRRSLIVKE HETLPYPEGT ACGEVLIAGE KGGDFAKTAF YGLGFAFIYA
ILQKVMHIVA EVPFYMTKQV NKYFPSARIS GEITPEYMGV GYIIGPRIAG VLVAGGVLSW
LALIPLLSSL VPADMIAAQL VKLGYLASVT TPGGKGNWDP SLHTFGDFSS AVYFAYVRQI
GAGAVAAGGF ITLIKTIPTI ISSFKGSIGS FKKEGTGEAG IANGAVPRTE RDLNVKIVLI
GSIALIVLMA FLPQLPGDSI GKKLLVGLLV VIFGAFFVTV SSRIVGLIGS SNNPISGMTI
ATLMGTCLVF IAVGWSGKVY EPMALVVGGM ICIAAANAGG TSQDLKSGYI VGATPMYQQL
ALFIGAIVSS IVIGLTVKFL DKPTAAMIAN GVTDHAIGST YYPAPQGTLM ATLAKGILSY
NLDWQFVLVG VFLAITMELC GIKSLSFAVG AYLPLSTTLP IFIGGAIRGL VDKKRKKDNI
QVSAEEEELG KGNLFATGLV AGGAVAGVII AILAGFDGSA SVLASINLEE KLSHTLGTGG
YFILGTVAFA LMGTYLYRVA VKK
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