Gene Cpin_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0194 
Symbol 
ID8356294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp239824 
End bp240846 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content49% 
IMG OID644962337 
Productrod shape-determining protein MreB 
Protein accessionYP_003119896 
Protein GI256419243 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTCT TTAATTTTTT AACACAGGAA ATAGCGATTG ACTTAGGTAC AGCTAACACG 
CTGATCATAC ACAACGACCA GGTGGTGGTG GATGAACCTT CCATTGTTGC TATAGAGCGC
GCAAGCGGTA AAATCGTGGC GGTAGGAAAG AAGGCCATGA TGATGCACGA GAAAACACAC
GAGTACCTGC GTACAATCCG TCCGTTAAAA GATGGTGTGA TCGCCGACTT TAACGCGGCA
GAAGGTATGC TTCGCGAGAT GATCAAACTG GTGTATCCCA AAAAGCCCTT ATTCTCCCCC
AGCTGGCGTA TGGTTATCTG TATACCATCC AGCATCACAG AAGTAGAAAA ACGCGCCGTA
CGCGACTCTG CTGAACAGGC AGGCGCGAAG GAAGTGTTCC TCATACATGA ACCTATGGCC
GCTGCATTGG GTATCGGCAT CGATGTAGAA GAGCCCGTAG GTAACATGAT TATCGACATC
GGAGGTGGTA CCACCGGTAT TTCCGTAATC GCCCTGGCAG GTATCGTTTG TGACCAGAGT
ATCCGTATCG CCGGTGATGA ATTCACTGCT GATATCATGG AAGCACTGCG TCGCTACCAT
AGCTTGCTGA TTGGTGAAAG AACAGCAGAA CAGATCAAAA TTCAGATCGG TTCCGCGCTG
AAAGAACTGG ACAACCCACC AGATGACGTG GCAGTAAACG GCCGTGACCT GGTAACAGGT
ATTCCTAAAC AGATCATGGT GTCTTACCAG GAAGTAGCAG AAGCGCTTGA TAAATCTATC
TTCAAGATCG AAGAAGCTAT CCTGAAAGCA CTGGAAACCA CTCCTCCGGA GCTGGCAGCA
GATATCTACC GCAGAGGTCT GTACCTCACA GGTGGCGGTG CATTGCTTCG CGGACTGGAC
AAACGTCTCA CACAGAAGAT CAAATTACCC GTACACGTAG CGGACGATCC GTTACGCGCG
GTAGTAAGAG GTACCGGAAT CGCATTAAAA CATGTAGGTA AGTATCCGTT CCTAATGCAA
TAA
 
Protein sequence
MGFFNFLTQE IAIDLGTANT LIIHNDQVVV DEPSIVAIER ASGKIVAVGK KAMMMHEKTH 
EYLRTIRPLK DGVIADFNAA EGMLREMIKL VYPKKPLFSP SWRMVICIPS SITEVEKRAV
RDSAEQAGAK EVFLIHEPMA AALGIGIDVE EPVGNMIIDI GGGTTGISVI ALAGIVCDQS
IRIAGDEFTA DIMEALRRYH SLLIGERTAE QIKIQIGSAL KELDNPPDDV AVNGRDLVTG
IPKQIMVSYQ EVAEALDKSI FKIEEAILKA LETTPPELAA DIYRRGLYLT GGGALLRGLD
KRLTQKIKLP VHVADDPLRA VVRGTGIALK HVGKYPFLMQ