| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0188 |
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| Symbol | |
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| ID | 8356288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 233281 |
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| End bp | 234141 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644962331 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003119890 |
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| Protein GI | 256419237 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.043939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATACGC TGTACGAGAA CCTGCGGTTT ACCGGCCATG ACCGGATGGA TACCTGGCAG
CAGGGTACAC ACAGCTGGGC AGCGTACAGC GTATACACAC AAAAGGCACA TCACGAAGTA
TATACCCCCC ACACTATTCT CAACCTGATC GTCAGGGGAC AGAAAAGAAT GTATGACGGC
CGCGTCATAC ATCAGCTCCA GGCAGGCGAT GTTTTTATCA TTCCTGCAGG TTCTTTGCTT
TGCTCAGAGA TACCCGGACA GCGATATGGA TACGAGAGTA TCAATATTGA ACTGCCGGAC
GCTATTATTA ACAAGTATTC CCTGCCGCAA ACGTCCTCCC TTCCTACTCC TGTCGGAGCT
ACATCATTAA CTGCAAGCAG TGCATGGCAA CAGCTGAAGA ATGAGCTTTT ACAACAGTTT
ACAGTTGCCA GATCCATACA TGCAGGACCG TCCCAGGCCC AGATCGCAGC CATGGCATTA
TCTCTTATGG GGCAAACAGC ACAGGGGCAA TCCATCATCC GGATGTTACA GCTGGCCACT
GCCGTCCAGC CAGCCACCAT GCATACCCTT GGGAAAGAGT TGTTTCAGAT GGGCGAACTG
GAGGAGATGG CCCGTCATGC CTGTATGAGC AAGGCCACCC TGAAAAGACG TTTCCGGCAG
GTGTATGATG TAGCGCCGAT GAACTGGATA TGGGAGAAGA GATTGGAGCA GTCGGCTTTT
CTGCTGCGTA CCCAAACGGA TCCCATTGCG GATATTGCTT ACCGCTCAGG CTTTGAAAAC
ATCTCTCACT TCTATCGGCT GTTCCGGAAT GCGTTTGGAA TGACGCCGGT AGCCTGGCGG
AAGTACTGCT TCCCGATTTG A
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| Protein sequence | MYTLYENLRF TGHDRMDTWQ QGTHSWAAYS VYTQKAHHEV YTPHTILNLI VRGQKRMYDG
RVIHQLQAGD VFIIPAGSLL CSEIPGQRYG YESINIELPD AIINKYSLPQ TSSLPTPVGA
TSLTASSAWQ QLKNELLQQF TVARSIHAGP SQAQIAAMAL SLMGQTAQGQ SIIRMLQLAT
AVQPATMHTL GKELFQMGEL EEMARHACMS KATLKRRFRQ VYDVAPMNWI WEKRLEQSAF
LLRTQTDPIA DIAYRSGFEN ISHFYRLFRN AFGMTPVAWR KYCFPI
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