Gene Cpin_0156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0156 
Symbol 
ID8356256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp187791 
End bp188867 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content44% 
IMG OID644962299 
Productfatty acid desaturase 
Protein accessionYP_003119858 
Protein GI256419205 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCTT TAACCAATGT AATAACAGAC CCTGTATATG TAAAAAAAAC AGGCCCTGAC 
TCTTTTTTAC AGCGAACTTT CAAGTCGATG ATCAGGGATG AACGCGATCT GCCGTTTGTC
TACCTCTCCC TGGAACTGAG CTTGATATTA TTACCGTTGG CCGTCATTTT ATACCTCCCG
CTGCCTGCCT GGGCATGGTG GACGGCCGCC GTACTCTATC AGGTGCTGAA TAATTTCAGG
TATAAAGGAC CCTTCGGATT AATGTTACAC TGCACCAGTC ACCGGGTGTT TTTTAATAAA
AAGTATGATT TTCTGAACCA TTACCTGCCC TGGGTACTCG GACCGCTCTT TGGTCAGACG
CCGGAAACAT ATTACAGCCA TCATATCGGG ATGCACCATC CGGAGAACAA TATGCCTGAC
GATGACAGCT GTACGATGCC TTTCCAGCGG GATTCCTTCC GGGGCTTCAG TAAATACCTG
GCGAGTTTCT TTTTTGCCGG CGTTATTAAC CTGTGCAGGT ACTTTATAAA AAAACACCGC
AAAAAATTAT TGGTAAGAGC CTCCAGAGGG GAACTTCTCT TCTTTGCCGC TTGCGTCGGA
CTTTCCTTTG TGAATTTTCC GGCCACTTTT ACAGTATTTA TGCTGCCTTT CCTGATTTCC
AGGATCATTA TGATGGTGGG TAACTGGGCG CAACACGCGT TTATCGATGT CAATGCCCCG
GACAATTCCT ACAAAAACAG CATTACCTGT ATCAATACAA AGTATAACCA CAAATGCTGG
AACGATGGTT ATCATATCAG TCACCATATA AAACCATCTA TGCACTGGAC GGAACACCCG
CATTATTTCA AACAAACCCT CCAGGAGTAT ATTGATAATG AAGCCATTGT ATTTGACGGC
ATCCATTTTC TACATGTCTG GCTCTGGCTG ATGAGCAAAA GGTATGACCT GCTGGCCAGG
CATTTTGTGA ATATTGGGGA TAAATACAGC TCAGACGAAG AAATTATAGC TTTTTTAAGG
GGGCGGACAA AAAAGATCGA CCTCGCTACT GTACCAGCCA CTAGTGCAAT TGCTTAA
 
Protein sequence
MKALTNVITD PVYVKKTGPD SFLQRTFKSM IRDERDLPFV YLSLELSLIL LPLAVILYLP 
LPAWAWWTAA VLYQVLNNFR YKGPFGLMLH CTSHRVFFNK KYDFLNHYLP WVLGPLFGQT
PETYYSHHIG MHHPENNMPD DDSCTMPFQR DSFRGFSKYL ASFFFAGVIN LCRYFIKKHR
KKLLVRASRG ELLFFAACVG LSFVNFPATF TVFMLPFLIS RIIMMVGNWA QHAFIDVNAP
DNSYKNSITC INTKYNHKCW NDGYHISHHI KPSMHWTEHP HYFKQTLQEY IDNEAIVFDG
IHFLHVWLWL MSKRYDLLAR HFVNIGDKYS SDEEIIAFLR GRTKKIDLAT VPATSAIA