Gene Cpin_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0152 
Symbol 
ID8356251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp183675 
End bp184004 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content42% 
IMG OID644962295 
ProductHipA N-terminal domain protein 
Protein accessionYP_003119855 
Protein GI256419202 
COG category 
COG ID 
TIGRFAM ID[TIGR03071] HipA N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA CTGCCAAGGT ATATTATGGC AATTCGCTTG CTGGCGTTAT CATAGCATCA 
GACACCGGCT ATAAGTTTAT ATACGATGCA GACTACCTGG CCCAAACATT TTCTAAACCT
ATAAGCCTCA CCCTGCCGCT GAGAAAAGAA GCATATCACA GCACGACACT GTTTCCTTTT
TTCGACGGAC TGATTCCGGA AGGCTGGTTA TTGGATATCG CGAAAGAGCG TTGGAAAGTG
AAAGGCAATG ACCGCTTTGC ATTATTATTA CTTACCTGTA AAGATGCTAT AGGCGCAGTA
AGTATCATTC CGGTAAACGA AATTGAATAA
 
Protein sequence
MHKTAKVYYG NSLAGVIIAS DTGYKFIYDA DYLAQTFSKP ISLTLPLRKE AYHSTTLFPF 
FDGLIPEGWL LDIAKERWKV KGNDRFALLL LTCKDAIGAV SIIPVNEIE