| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0136 |
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| Symbol | |
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| ID | 8356235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 166355 |
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| End bp | 169681 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644962280 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003119840 |
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| Protein GI | 256419187 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGA TTGTCAAACT CAACCGCGTC GTCCTATACT GTTGTATGGT TGTTCTGTTC
TGTCTGCAAC ATAGGGTTTA CGCTGCTCCG ACTCAGGGGA AACCGGTGAG TCTAACGATT
AAGAATTCAT CTTTAGCGGA GGTATTACGT CAGGTGTCGA AGAAGAGCGG GCTGTATATT
TATTTCCAGG ATGCAGATCT GGCGGGTCAT CGGAATGTGT CGCTGGATGC GAAGAATAAG
CCGGTCGAGA GTGTTTTGCA TGAGTTATTG GATGAGCGGG GGTTTTCGTG GGTGGAGGTG
AGTGAGAATA CGATTGCGGT TAAAAAAAAA TTAGAGAGAG AGGAAGGAAA GGTTGAGATG
GATACGGTGA GTACGATAAC GGTGACGGGG AAGGTGGTGG ATGAGAAGGG GGAGCCGGTG
ATTGGAGCCA CGGTGGTGGT GAAGGGGGGG AAAGTTGGGA CAACCACAAA TGTGAGAGGA
ATATTTGAAC TAAAAGGAGT TAAAACTAAT TCTTCATTAG TTATATCTAA CCTTTCATTT
TTATCTAAAG AAGTTGCTGT TAAAGGTCGA TTGGTAATAG GTGAAGTGCA ACTAAAAGAA
TATGTTGGAG TATTAGATGA GACCGTAGTC ATTGCATACG GGACTACAAC AAAACGTTTT
AATACTGGAA ATGTAGCTTC TGTTAGTGCT GCTGAAATTG AAAGACAACC GGTTAACAAT
CCGTTATACG CATTGCAAGG AAGAGTTGCC GGACTTCAAG TAACACCAAC AACCGGTTTA
GGTTCAGGAG CTGTTAGTAT TCAGATTAGA GGCAGAAACT CCTTAAGCTT CCAGTCTGAC
CCATTAGTAG TTGTGGACGG GCTTCCTGTT GCCAATAATA TAACAGGACT GGGTCATGGT
AGCTTGCTAC AAATTTCAGC TTTGAGTTTT ATCAACCCTA ACGACATAGA GTCAATTGAG
GTATTAAAAG ATGCAGATGC AACATCTATA TATGGAAGCA GGGGGGCTAA TGGTGTTATT
CTTATCACAA CCAAAAAGGG GAAAGTTGAT GATGTCAGAA TTGATATAAA TATTCGAAAT
GGATGGTCTG ATGTTCCACG AAGAATGAAA ATGCTAAATA CGACACAGTA TTTGGATTTA
AGGAAAGAGG CATATGCAAA TAGTGGAATC GATATATCCA GCTTGGAGTT GTCAAGAAGC
AATGTAGATG TTAAATATTG GGATAAGGAT CGTTACACAG ATTGGCAGAA GGTATTAATT
GGTAATCATG CCAAATATAA TGACATACAA GGAACTCTAT CGGGAGGCTC TACACAAGTT
CAATACACGT TAGGTGGAAA CTATCATAAT GAAACAACTG TGTTTAGTAA AAACGACTAT
GATAGAAAGG GGAGTGCTCA TATGAGTATT TCCGGTACAA CGACTAATCA AAAATTTAAA
GGTATTGTTA GCGCTAGTTA TTTAATAGAT AACAATAGGC TTCCTATGAC CGATTTTACT
AGGAGCGCAT TGACATTGTC CCCTAATGCC CCAAGTTTGT ATACGTCCGA AGGAGCGTTA
AATTGGGGAC CAATGCCTAA TGGTAGTCGC AGTTGGGAAA ATCCTTATGG AGAATTATTT
AAAAGTTATG AAGCTCGTCT TAGTAATCTT ATATCTAGTG CAACTTTTAG CTATTCATTT
AGCGATGCTT TTACGGCGAA AATTCAAATG GGTTATAATG AGTTGAGAGG GAATTCATTC
CGTAAGACAT ATCCTTTTGC CGGGCGAGCC CCAGAGTTTT TAAATGAGCC AGGTAACGCC
TCATTTAATG CAAGTAATAT GAAAAATTTG AGTTTCGAAC CGCAATTGAA CTATAAATTC
AATTTGAAAA AAATAGATTT TGACATTCTA TTTGGTGGTT CTATTCAAAA TACCACAAAG
GAGGAGCAGT TTATTTTTGC TCAAGGTGCG ACCAATGATG CCTTATTAAA AAATCTAGCA
GCAGCAACAT ATTATTATTT AAATAATAAT TCTTCTCAAT ATAAATATGC TGCAGCATTT
GCACGAATTG GATTCAATTG GGATAAAAAG TATATATTAA ATTTAAGCGC TCGTCGGGAT
GGAAGCAGCC GTTTTGGTCC TAATAACCAA TTTGGGAACT TCGGATCAAT AGGAGCAGCA
TGGTTATTTG GCCAAGAAGA TTTTTCAAAA ATAGTATTTC CTTTTCTCAG TTTTGGAAAG
ATTAGATTCA GTTATGGGAC ATCCGGAAAT GATGGAATCG GAGATTATCA ATATCTAGAG
CGATACGATC CAATAGATGT ATCTGATCCA TATCAAGGTG TTAGAGGATA TCGTACTAGA
GGGCTTTTTA ATCCATATTA TGCTTGGGAA GTAACAAAAA AAATGGAGTT AGGCTTGGAA
ATTGGAGTTC TAAAAGATCG GCTTTTTTTA ACGACTAGTT TTTTTAGAAA TCGATCAAAC
AATCAATTAC AAAATTATCC CTTTTCAAGT ATAGTCGGGC CTGGAGGGCC ATTATATAAT
ATTGGAGCTT TAGTACAAAA TCAAGGAATT GAGGTTTTAA TCAATTCGGA AAATATTAAG
AATAAAAAAT TTAAGTGGTC TACATCATTT AATATAAGCA AAAATAGAAA TAAATTATTG
TCCTATCCCG ATATTGAGAA CTCCGCCTAT TACCAGTCAA TAATTGGGCA GCCATTTTAT
GGAGAAGTAA GAGCATATAA TTCAACAGGA GTGGACCCGG CAACAGGCAA ATATTCTTTT
CTTTCTGTTG ATGGAAAGAT TGTATCGGAC CCTATAGATC CTAATCGTCA AGATTATGGT
CAGTATTTAA GGATTTTAAC AACCCCAAAG TTTTTTGGTG GGATGGGTAA TACCCTTTCA
TGGGGAAACT TTACACTTGA TATCTATCTC CAATTTACTA AGCAAAACGG AATGAATCCT
ATGATGGATT TTATTTTCTT AGCCGGATCT CAAAATAATT TACCTGTTGA ATTTTTAAAT
AGATGGCAGA AGAGCGGGGA CAAATCCGAT TTTCAAAAGG TCTATAATGT TCGTCCTGAT
GATTATAATA CTGCGTTGGA TAGGGTTGCG GGTAGCAACT ATTCTTATAC AGATGCGTCT
TTTATTCGAT TAAAGAATAT GTCTCTTTCT TATAGTATGT CTAACGACTT AGTGAAAAAA
ATTCGATTGA AAGATTTGCG GTTATATTTT CAAACACAAA ATTTATTCAC TATTACTGGT
TATAAGGGAT TGGATCCCGA AACTCAAACA ATTGGTTCAT TGCCTCCGTT GAGAACAATG
ACAGTAGGAG TGCAAGTGGG ATTATGA
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| Protein sequence | MQKIVKLNRV VLYCCMVVLF CLQHRVYAAP TQGKPVSLTI KNSSLAEVLR QVSKKSGLYI
YFQDADLAGH RNVSLDAKNK PVESVLHELL DERGFSWVEV SENTIAVKKK LEREEGKVEM
DTVSTITVTG KVVDEKGEPV IGATVVVKGG KVGTTTNVRG IFELKGVKTN SSLVISNLSF
LSKEVAVKGR LVIGEVQLKE YVGVLDETVV IAYGTTTKRF NTGNVASVSA AEIERQPVNN
PLYALQGRVA GLQVTPTTGL GSGAVSIQIR GRNSLSFQSD PLVVVDGLPV ANNITGLGHG
SLLQISALSF INPNDIESIE VLKDADATSI YGSRGANGVI LITTKKGKVD DVRIDINIRN
GWSDVPRRMK MLNTTQYLDL RKEAYANSGI DISSLELSRS NVDVKYWDKD RYTDWQKVLI
GNHAKYNDIQ GTLSGGSTQV QYTLGGNYHN ETTVFSKNDY DRKGSAHMSI SGTTTNQKFK
GIVSASYLID NNRLPMTDFT RSALTLSPNA PSLYTSEGAL NWGPMPNGSR SWENPYGELF
KSYEARLSNL ISSATFSYSF SDAFTAKIQM GYNELRGNSF RKTYPFAGRA PEFLNEPGNA
SFNASNMKNL SFEPQLNYKF NLKKIDFDIL FGGSIQNTTK EEQFIFAQGA TNDALLKNLA
AATYYYLNNN SSQYKYAAAF ARIGFNWDKK YILNLSARRD GSSRFGPNNQ FGNFGSIGAA
WLFGQEDFSK IVFPFLSFGK IRFSYGTSGN DGIGDYQYLE RYDPIDVSDP YQGVRGYRTR
GLFNPYYAWE VTKKMELGLE IGVLKDRLFL TTSFFRNRSN NQLQNYPFSS IVGPGGPLYN
IGALVQNQGI EVLINSENIK NKKFKWSTSF NISKNRNKLL SYPDIENSAY YQSIIGQPFY
GEVRAYNSTG VDPATGKYSF LSVDGKIVSD PIDPNRQDYG QYLRILTTPK FFGGMGNTLS
WGNFTLDIYL QFTKQNGMNP MMDFIFLAGS QNNLPVEFLN RWQKSGDKSD FQKVYNVRPD
DYNTALDRVA GSNYSYTDAS FIRLKNMSLS YSMSNDLVKK IRLKDLRLYF QTQNLFTITG
YKGLDPETQT IGSLPPLRTM TVGVQVGL
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