| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0134 |
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| Symbol | |
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| ID | 8356233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 162103 |
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| End bp | 164757 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644962278 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003119838 |
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| Protein GI | 256419185 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGT ATTGTTATGC CTTAATATTT ACGATATTTT CTTTTTCTAA ATATGCCGTT
AACGCACAAG TTGCTAAGAC TGTTTTTCTC CCAAAATGTG GGATTCCAAC TCGTTGGGCT
TCACAAGTAG ATGTTGAACA TCCTTTACCC GATTATCCTC GGCCTCAAAT GCAAAGGGAT
AATTGGATCA ATTTAAATGG TTTGTGGGAC TATGCAATTA CAAATGAAAG AAACGTTCTA
CCAGATATTT ATAGTGGGAA AATTTTAGTT CCATTTCCAA TTGAATCATC CCTTTCGGGT
GTTCGAAAAG GACTAACACG GTCTCAAATA TTATGGTATA AACGTAACGT TAAAATATCT
GGCATAAAAA GCGACGAGAG ATTATTACTC CACTTTGGAG CAGTAGACTA CAAAGCTACT
ATTTATGTTA ATGGAAAATT AATTGGAACT CATGAAGGTG GATATACATC GTTTTCTTTG
GATATATCCC ATGTTGTCAA ACGAGGTGAT AATGAGATTG TAGTAAAGGT ATATGATCCA
ACAGATGATG GGATAAATCC ACATGGAAAG CAATCGTTAA ATCCAGGAAA TATATATTAT
ACCGCAAGTT CTGGTATTTG GCAAACTGTA TGGTTGGAAA GAGTTCCATC TAGTTATGTT
TCCGACGTAA CTATTGCTTC AGATATTGAT AGTGGATATG TAAAAATAAA TGTTGCAACT
GTTGATTGTT TGGGCAAGGG AGATTCAATA AAGATTAGTT GTTCTGATGG CACTTCCGCG
ATTGGAGCTT TGAAAGGTGA TATGAAATTG TTAATTAAAT CGCCTCATTT ATGGACCCCT
GATGATCCAT TTCTTTATGA TTTGAATATA TCCCTAATAC GAAATAACAA AGTTATTGAT
GTTGTTAACA GTTATTTTGG GATGAGAAAG ATTAGTGTAA AAAAAGATTC AACTGGGGTC
GATCGTATAT TTTTGAATAA TAAATATGTG TATAACTTAG GCGTTCTAGA TCAAGGTTTC
TGGCCGGATG GATTATATAC TGCCCCAACT GATGATGCGT TGAAATTTGA TATTGCTATC
TGTAAGAAAA TGGGATTTAA TACTATAAGA AAGCATATTA AGATTGAATC TGACAGATGG
TACTATCATG CAGATAAGCT CGGTGTGATT GTTTGGCAAG ACTTTGTAAA CCCTAATGTT
AAATTATTAC CGAGTGCTAA AAAGGCTTTT GAAGATCAGG TAGAAGAAAC AATAAAACAA
TTATACAATC ATCCATGTAT TACCACTTGG GTCTTATTTA ATGAGAAGTG GGGGCAGTAT
GATCAACAAC GTTTAACTAG ATGGGTCAAA GAAAAAGATC CATCTAGATT GGTCAATGGA
CATTCAGGAG AACTGTTATA TGTGAATAAT CAACTTAGAA GTCCTGCTCC TGATGCATAT
ATTGATGCTG ATTTAACTGA TATACATTCA TATCCATATC CTAGAAATGC ACCCAGCCTA
GATGGTAAGG CTCGCGTTTT GGGAGAGTAT GGGGGGATAG GCGTTTCTGT GGATGGTCAT
AAGTGGAATG ATCTTGAAAC TGGTTGGGGC TACGATGGGA CTATTAGTCC TTCTGCTATG
CTCAGTCAAT ATGAAGATAT GATGGATTCT ATTATCATAT TGGAACGTGA TGGTTTAAGT
GCATCTATAT ATACTCAGCC ATTTGATGTT GAGTCTGAAC AGAATGGGCT AATCTCATAT
GATCGGCAGG TGGCTAAAGT CCCACTAGAG AAGTTACAAG CTATAAATAA TAGAATTCTG
AATAGGATAT CGTCGATAGG AGCGACACAC GAAAACATAA TCATTGATGT TATGGATACA
ACAGTGGTAA GTTATAATGT GCGAATGGAC GAATTTAAAA ATGGCAGAAA TGATTCCGTA
TTTCTACGTC GGCTTACTGT TGAGGCTAAT AAGCGTTCGC AGTTAGATGA GGTTCAGCTA
ATAGCCAATC GCTACTTAAA AGGATTAAAA AATCCCTTTG CAGAAGAGAA TTTACGTTTC
ATTACAAAAT TCACCAAAAA TGTCAATGAC ACTGGATTCT CTATTTTATA TAATAATGTT
AATAGAGTTA ATGCTATTCT TGGGCCTGAT GAGGCGGAGG CATGTATTAC AGCGTGTATT
GAAAACAGCG AGATTAAGCC GTATATAGAT GAACAGAAGC ATCCAGAATG GGATGAAATT
AAAAAACGCA TTTCTAGATT CGGTCCTTTG GGTAAGGAAA CTTTACTTCA AGCACAAGTT
TTTTACTCCA TTAATTTAAA AGATTATAAT TTATTTAGCG AAGTGGCTTC TGAATGGTAT
AATACATATG GTAAGAATAG AAAGTGGGTT ACAGATTTTT TGATTAATAC AATGTCCTGG
TATTTGTTCT TGGATTGTAA GGATACTAGT GCGTTGACAA TTGCAATTGC ATGGATACAA
AAAGTTGTTG AGAGATCACC GTCGCCTGAT AATTATGATA CCTATGCTAA TCTTCTTTAT
AAAACTGGAG AAAAAGACAA AGCAATCGAA ATCCAAGAAA TAGCTGTGAA ATTGCACACT
GGGGACGGGA ATATATCCGA ACTAATTACA CATTTGGAAA AAATGAAAAA AGGAGAACCG
ACGTGGGATA ATTGA
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| Protein sequence | MNKYCYALIF TIFSFSKYAV NAQVAKTVFL PKCGIPTRWA SQVDVEHPLP DYPRPQMQRD
NWINLNGLWD YAITNERNVL PDIYSGKILV PFPIESSLSG VRKGLTRSQI LWYKRNVKIS
GIKSDERLLL HFGAVDYKAT IYVNGKLIGT HEGGYTSFSL DISHVVKRGD NEIVVKVYDP
TDDGINPHGK QSLNPGNIYY TASSGIWQTV WLERVPSSYV SDVTIASDID SGYVKINVAT
VDCLGKGDSI KISCSDGTSA IGALKGDMKL LIKSPHLWTP DDPFLYDLNI SLIRNNKVID
VVNSYFGMRK ISVKKDSTGV DRIFLNNKYV YNLGVLDQGF WPDGLYTAPT DDALKFDIAI
CKKMGFNTIR KHIKIESDRW YYHADKLGVI VWQDFVNPNV KLLPSAKKAF EDQVEETIKQ
LYNHPCITTW VLFNEKWGQY DQQRLTRWVK EKDPSRLVNG HSGELLYVNN QLRSPAPDAY
IDADLTDIHS YPYPRNAPSL DGKARVLGEY GGIGVSVDGH KWNDLETGWG YDGTISPSAM
LSQYEDMMDS IIILERDGLS ASIYTQPFDV ESEQNGLISY DRQVAKVPLE KLQAINNRIL
NRISSIGATH ENIIIDVMDT TVVSYNVRMD EFKNGRNDSV FLRRLTVEAN KRSQLDEVQL
IANRYLKGLK NPFAEENLRF ITKFTKNVND TGFSILYNNV NRVNAILGPD EAEACITACI
ENSEIKPYID EQKHPEWDEI KKRISRFGPL GKETLLQAQV FYSINLKDYN LFSEVASEWY
NTYGKNRKWV TDFLINTMSW YLFLDCKDTS ALTIAIAWIQ KVVERSPSPD NYDTYANLLY
KTGEKDKAIE IQEIAVKLHT GDGNISELIT HLEKMKKGEP TWDN
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