| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0111 |
|---|
| Symbol | |
|---|
| ID | 8356210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 136489 |
|---|
| End bp | 137550 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644962255 |
|---|
| Product | phosphoribosylglycinamide synthetase |
|---|
| Protein accession | YP_003119815 |
|---|
| Protein GI | 256419162 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAA CCGGTACCCC AGTCGCACTG CTCTATCAGG CGCAGCAACC ACCAGCCAGG
AACGGCATTT TGAAACCTAT GAAGCCCGGA GGTTATTCAG ACAGCGGAGC GGATATTGCC
TATGCACTGC GTGAAAAACA AGTACCGGTC AGCACTCCTG TGATCCATCC CCAGCTGATG
ATCGACCTTG ACTGGGTATT TCCCGATACG GAGGCGGGTA TACTCCATGC ACTCTCAAAA
GGCGCCCAGG TATTATGGCT GAATACCATC CTGTATAACG GCCATCCGGT AGAAGCATTT
CTGAAAAAAG GAATCGCCGC TGTCGGACAA TTACCCCGCA ATACTGATCT TTACGATGAC
AAATGGACCA CCAATAAACT CCTGCAAAAA AACAACCTCC CCATTCCACC AGCCATCCTG
ATCAACAAAG ACAATCTGCA CGATTACCAG CTGCATTTTT CCTTTCCGGC AGTAGCGAAA
CCTATCCGTG GCAGAGGCAG TGACGGCGTG CAGGTCGTAG ATACAGCAGA CGGGCTGCAT
AAGGTACTTA AAGAGATGTT TGCGGAAGAT AAATACGGTA CCGCCGTATA CGTAGAAAAG
TTCCTTCCTG GCAGAGAAGT GACCATTACA GTCATGCCAC CAGGTAAATA TATGATCAGA
GATATCTGTC AGGAAAAGAT CAATTACTGG AGTTTACCAC CGGTAGAACG TTTCAATCAC
GAGGATGGCG TAGCACCTTA TAATGGCACT GTCGCTGTTG TCAACAACAG CAAGGTACTG
GACGATGCAC AGCTGCAATC GCCTGCTATC ATCACCTTAT GTAAACAATG TGAATCTGCT
GCGGCATTAG TCGGAGCAAA GGCTCCTGTG AGAATTGACT GCCGCCAGGA TGAACAGGGA
CGTTATTTCC TGTTTGACCT GAATATGAAA CCTAATATGA CCGGCGCTTC CCGTCCGCAT
AGGATGGACC AGGATAGCCT GTCAGCATTG GCAGCCCGTA AGATAGGCTG GACCTTTGCC
GATCTGCTGG AAAATATGCT ACGCCAGCAA TGGCGGATGT AG
|
|---|
| Protein sequence | MSVTGTPVAL LYQAQQPPAR NGILKPMKPG GYSDSGADIA YALREKQVPV STPVIHPQLM
IDLDWVFPDT EAGILHALSK GAQVLWLNTI LYNGHPVEAF LKKGIAAVGQ LPRNTDLYDD
KWTTNKLLQK NNLPIPPAIL INKDNLHDYQ LHFSFPAVAK PIRGRGSDGV QVVDTADGLH
KVLKEMFAED KYGTAVYVEK FLPGREVTIT VMPPGKYMIR DICQEKINYW SLPPVERFNH
EDGVAPYNGT VAVVNNSKVL DDAQLQSPAI ITLCKQCESA AALVGAKAPV RIDCRQDEQG
RYFLFDLNMK PNMTGASRPH RMDQDSLSAL AARKIGWTFA DLLENMLRQQ WRM
|
|---|
| |