Gene Cpin_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0075 
Symbol 
ID8356172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp89333 
End bp89875 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID644962220 
Productphosphotransferase KptA/Tpt1 
Protein accessionYP_003119782 
Protein GI256419129 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1859] RNA:NAD 2'-phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA AACAAACAAA AAGCATCAGT AAGTTTATGA GTCTGGTGCT CAGACATCAA 
CCCGAGACCA TCGGGATCAC ACTGGATGAA AATGGATGGA CAGATGTAGA GGAACTGTTA
ACCCGGATGA GTCAACACAA ACACCCGATC ACATTAGCAC AGCTCCAGGA AGTAGTCGAA
ACCAATGATA AAAAACGTTT CGCCTTCAGT GAAGACGGTA CTAAAATACG CGCCAGCCAG
GGCCACTCTG TAGACGTTTC CCTGGGCCTT GACCCGGTAA CGCCGCCTGA ATACCTGTAT
CACGGTACCG TAGCCAGATT CCTGGACAGT ATCAAAAAAG AAGGCCTGCA GAAAATGAGC
CGTCAACACC TCCACCTCAG CAAAGACAGA GAAACCGCTG TCAATGTGGG CAGCCGCAGA
GGTGCGCCCT ACATCCTGAC CATCAGAACA GGGCAGATGC ACAGAGATGG CTTCCTGTTT
TACCTGTCAG ACAATGGCGT ATGGCTGACG GACCATGTAC CTCCTGCTTA CATTGAAATT
TAA
 
Protein sequence
MNEKQTKSIS KFMSLVLRHQ PETIGITLDE NGWTDVEELL TRMSQHKHPI TLAQLQEVVE 
TNDKKRFAFS EDGTKIRASQ GHSVDVSLGL DPVTPPEYLY HGTVARFLDS IKKEGLQKMS
RQHLHLSKDR ETAVNVGSRR GAPYILTIRT GQMHRDGFLF YLSDNGVWLT DHVPPAYIEI