| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_9048 |
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| Symbol | |
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| ID | 8340443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10460685 |
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| End bp | 10461632 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644962140 |
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| Product | D-alanine/D-alanine ligase |
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| Protein accession | YP_003119702 |
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| Protein GI | 256398138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.499515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.480227 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACC TGGGCCGTGT CGTCGTCTTG GCCGGCGGCC TCAGCCATGA GCGCGACGTC
TCGATCCGTT CCGGGCGCCG CGTGGCCGAC GCGCTGCGCA GTGCGGGGGT CGAGGTACAG
GTCCGCGACA TCGACGCCGC GCTCCTGCCG TCGCTGCTCG CCGACCGCCC CGATGCGGTG
TTCCCCACCC TTCACGGCGC CACCGGTGAA GACGGTGCGG TGCAGGGAAT CCTGGCGCTG
CTGGGTGTCC CCTACGTCGG CTCGTCGGCA GCCGCCTGCC GCCGCGCCTT CGACAAGCCT
TCGGCCAAGG ACGCGATCCG CACGGCCGGA CTCGCAACTC CCGACTGGGT CGCGATCCCC
AAGACGACGT TCCGAGACCT CGGCACGCAC GCAGTCCTGG ATGCCGTGTC CGCCGCGCTG
CCGATGCCGC TGTTCGTGAA GCCCGCTCGC GGCGGCTCCT CTCTCGGCGC CGCCGCCGTG
CACACCCGCG AGGACCTGCC CTCCGCGATG GTCGCCTGCT TCGCCTACGA CGAGACGGCA
CTCATCGAGC GGCACATCAC CGGGCGCGAG ATCGCCGTCT CGGTCGTCGA CACCGGCACA
GGTCCGCAGG CACTGCCCGC CGTCGAAATC GTCGCGGACT CCGGCGTCTA CGACTACGCC
GCCCGCTACA CCGCAGGCAT CACCGAGTTC TTCGCCCCAG CCCGGCTCAC CGCCGAGGAG
GCGAAGTCGG TCGAGCAGCT GGCTGTGCGC GCCCACACCA CCCTCGACTT GTCCTGCGTG
TCCCGCACCG ACCTGATCCT CGACGCCGAC GGCATCCCCT GGTTCCTGGA AGTGAACGTG
GCACCGGGTC TCACCGAGAC CAGCCTGCTC CCGCTCGCCG CCGGTGCGGC CGACCTCGAC
CTCGGCGTGC TCTACCGCGA TCTGGTCCAG GCGGTCATCG CCGAGTAG
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| Protein sequence | MSDLGRVVVL AGGLSHERDV SIRSGRRVAD ALRSAGVEVQ VRDIDAALLP SLLADRPDAV
FPTLHGATGE DGAVQGILAL LGVPYVGSSA AACRRAFDKP SAKDAIRTAG LATPDWVAIP
KTTFRDLGTH AVLDAVSAAL PMPLFVKPAR GGSSLGAAAV HTREDLPSAM VACFAYDETA
LIERHITGRE IAVSVVDTGT GPQALPAVEI VADSGVYDYA ARYTAGITEF FAPARLTAEE
AKSVEQLAVR AHTTLDLSCV SRTDLILDAD GIPWFLEVNV APGLTETSLL PLAAGAADLD
LGVLYRDLVQ AVIAE
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