Gene Caci_8988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8988 
Symbol 
ID8340381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10402691 
End bp10403767 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content70% 
IMG OID644962078 
Producthypothetical protein 
Protein accessionYP_003119642 
Protein GI256398078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.189773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG CACGAACTGA CATCGAGTCC GGCCCCAACC CGCCGCCGAG CCCGCGCGGC 
ACCATCACGA TCACACACAC CCGAGCCGAC GGCACGACGG CCGTCGGCGG CGCCAAGGGC
GACGGATCCG GCGACATCCT GAAGGACTAC CCGCAGCGCT TCCGCTGGTC GCCCTACCTG
CGCTGCTGGG TCATCCGGAA CTCCCGCGAC AAGCAAGCTG ATCACCGCAA GATCGAGGCT
GCGGCGACCG CGCTGCGCGC GGCTGGCTTC GAGGTCAGCG TAACCATCGA CGAAGACACC
AGGCGCACCT TCGCCGAAGC CGAGGCCGAC CGCTACGAGC GCGCCGAAGC CCGCGCCGAG
CGCCGCCAGG ACTACGCCGA CGCCGCCGCC GACCGTTCCG CAGCGCTCTA CAGCGCCGGC
CGCGAGAAGC TGTCCCGGAT CCCGTTCGGT CAGCCGGTCC TCACCGACCA CTACTCCGCC
AACCGGGACC GGAACTACCG CGCCCGCGCC GCTGCCCAGA TCGACAGATC CTTCGTTGAG
GCCGACAAGC ACGCCCATCA CGCCAACCTC GCCGCCGCAG CCGCCGCCTA CCGCGGCCAT
CGCGAGAACG TTCCCCGCAC GCTTCGGCGC ATCGAAAAGC TGGAGGCCGA GGAGCGGCAG
CTCCTCCGCC TGCTCGAACC CGTCGACCAC GAAGGCGGCA ACGCCGACAC CTCCGAGTGG
GACGCGGAGC TGAAGCGCCG CCTGGACGAG ACGCGCGAGC AGTTGGACTA CTGGCGGGAG
CACGTCAAGG CCGCCGAGGC GGACGGCGTC AAGGTCTGGT CGAAAGCCGA CTTCGCCAAG
GGCGACTTCG TCCTCTACGG CGGCCGATGG TACGAGGTCC TGCGGGTCAA CCCCAAGAGC
GTCACTGTCC CCACGAGCTT CAACGGCTGG AGAGAACCGA TCGTGCGCGC CAACGACCCG
AAGTTCCCGC GCACCGCCAC CGCTGCCTAC TACGAGGTCC GCGGTCGGCG GAGCGCCGAC
GAGATGGCCG CTGCGATTGC CTCGGCAGAC CCAGGCCCCA CCGGAGCCAG CGCGTAG
 
Protein sequence
MTTARTDIES GPNPPPSPRG TITITHTRAD GTTAVGGAKG DGSGDILKDY PQRFRWSPYL 
RCWVIRNSRD KQADHRKIEA AATALRAAGF EVSVTIDEDT RRTFAEAEAD RYERAEARAE
RRQDYADAAA DRSAALYSAG REKLSRIPFG QPVLTDHYSA NRDRNYRARA AAQIDRSFVE
ADKHAHHANL AAAAAAYRGH RENVPRTLRR IEKLEAEERQ LLRLLEPVDH EGGNADTSEW
DAELKRRLDE TREQLDYWRE HVKAAEADGV KVWSKADFAK GDFVLYGGRW YEVLRVNPKS
VTVPTSFNGW REPIVRANDP KFPRTATAAY YEVRGRRSAD EMAAAIASAD PGPTGASA