| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8918 |
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| Symbol | |
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| ID | 8340311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10329397 |
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| End bp | 10330875 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644962008 |
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| Product | integrase family protein |
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| Protein accession | YP_003119572 |
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| Protein GI | 256398008 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0126697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.144879 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGTTGGG TCAGAAAGCG CATCAGCAAG AACGGAACGG AACGGTTCGT AGCCAACTAC
CGCGACATCC GCGGCAACAC CCGCTCGGCG GGTACCTACT CGACCGAGAA GCAGGCCGAG
GACGCGGCGA AGAAGGCCGA GAACGACATC GCGGCTGGGC GCATCGGCGA CCCGAAGCGT
GGACGCCAGA AGTTCCGTGC CTACGTGCTG AACACGTGGC TCCCGAACCA CGAGATCGAG
TGCTCGACCC GCCAGACCTA CACCTACCTG ATCAACAAGC ACATCCTGCC GGAGTTCGGC
GGGATGCGGA TGGTCGACGT GCTACCCGAG CACGTCCGTG AGTGGATGAC GAAGATGGCC
GGCGCGGGCG TTTCCGCTCA AAGCCGGCGC AACGCCAAGG TGGCGATGGA CGCGATCTTG
ACTACTGCGT TCAACGACCA GGTCACGTTC CTGCACGCTG GCCAGGGCGT GAAGCGGCCC
ACGGTCGCCA AGAAGACGAA GCGGATCATC ACAGCGGAAC AGTACGACAA GCTCCACGCG
GCGATCGGCG AGAGTGAGCA CGACGGCGAG CGCATGCAAC TGCTCACCGA GACCGACATC
GAGACAGGCA TGCGGTGGGG CGAGCTGACC GAGTTCCGCG TCAAGGATCT CGATCCCGAT
GCTGACCTCA TCACCATCGC GCGTGCGGTC GTGAAGCTCG ACCCGAAGTT CCACCCGCAG
GGGAAGCGCT TCCTGGTCAA GGACTATCCC AAGGACGGCG AGTGGCGTGA GCTGAAGATT
TCCCGCCGCC TGACCACGAG CCTTGTCGAC TTCGCTGCTC GTCGCGGTCT GGGCTCCGAG
GACCTGTTCT TCGAGTACGT CCCTCCGACG GAGCCGAAGA AGCGCAGGCG CCCGGACGAA
CTCCCCGATC CGATCACCCT GGGCTGGACC GAGCCCCATC CCAAGTCTGG CCGGCAGTAC
CGACACGGCA CGATCTCCGC GTACTCCGGC ATGAAGTGCC GCTGCCAGTT CTGTCGAGAC
GCGATGTCGG CGTACCGGGC TGAGCGGCGT GCCATCGGCA AGGACGCTCC GCGGAACGCA
CCGCGGCACC GGGACACGGA CGGCCATATC GACGGCGACT GGTTCCGGAA GCAGATCTTC
TACCCCGCGG TGGAAGCTGC GGGCATCTCC TTCAAGGTCA CCCCGAAGTC GTTGCGGGAC
GCACACGCGT CCTGGCTCCT GGCCGGCGGC GCTGACCTCC AGGTCGCGAA GGAACGCCTC
GGCCACGGCA GCATCACTAC GACTGAGCAG TACCTCGGCA CACTGCCAGG CGCCGGCGAG
GCCGCTCTCG CGGCCCTCGA CGCCTTCCGG GGTCGCGGCG CTGTCGCCGA TCAAGCCGAG
CCGATGCCGA CGGCCGCTGA AGCTGTGACG CCAGACATGG CGTCGGTGCT CAAGATGATG
GAAGAACTGA AGCTGTCTGT GGACCGACTT GCCGCCTAG
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| Protein sequence | MGWVRKRISK NGTERFVANY RDIRGNTRSA GTYSTEKQAE DAAKKAENDI AAGRIGDPKR
GRQKFRAYVL NTWLPNHEIE CSTRQTYTYL INKHILPEFG GMRMVDVLPE HVREWMTKMA
GAGVSAQSRR NAKVAMDAIL TTAFNDQVTF LHAGQGVKRP TVAKKTKRII TAEQYDKLHA
AIGESEHDGE RMQLLTETDI ETGMRWGELT EFRVKDLDPD ADLITIARAV VKLDPKFHPQ
GKRFLVKDYP KDGEWRELKI SRRLTTSLVD FAARRGLGSE DLFFEYVPPT EPKKRRRPDE
LPDPITLGWT EPHPKSGRQY RHGTISAYSG MKCRCQFCRD AMSAYRAERR AIGKDAPRNA
PRHRDTDGHI DGDWFRKQIF YPAVEAAGIS FKVTPKSLRD AHASWLLAGG ADLQVAKERL
GHGSITTTEQ YLGTLPGAGE AALAALDAFR GRGAVADQAE PMPTAAEAVT PDMASVLKMM
EELKLSVDRL AA
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