Gene Caci_8877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8877 
Symbol 
ID8340270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10288190 
End bp10289095 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID644961967 
Productpeptidase S41 
Protein accessionYP_003119531 
Protein GI256397967 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0793] Periplasmic protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGG AGCCGAAGGT CCTCGACGCC GCGCTCGCCC GGTTCGAGAC GGAGTACATC 
GATCCCGACA AGGCGGCTCG GGCCGCGGCC GAGATTCGGC GCGCCGCAGC CGCTGGCGAG
TACGCGCAGC TCGACGGTGC GGCGGCCTGT GCGGCTGTCA CCAAGGTGTT TGCTGACGTC
TGTCAGGACA AGCACCTGCG CCTCATATGG AGCGAGGAAC CCGAGCCGCT CGAGGATGAC
GACGAGGAGG CCGGCGCGGC CATGTTCGCC GCGCTGTGCC GCGAGCACAA CAACGGCGTC
CGCAAGGTCG AGGTGCTGGA CGGCGGCATC GGCTACCTCG ACCTCACGCT GATCCCCACG
GCCGAGATCG GCGGCGCCAC CATCGCCGCC GCGATGCAGC TCCTGGCCGG TACCCGTGCG
CTGATCGTGG ACCTGCGCAG CACGATCGGC GGTTCCACCG ACGGCGTGCA GCTGTGGTGC
AGCTACCTGA TCCGCGGCGC CGACACCCTG CTCACCACCT CGCACTCCGT GGTGAAGGGC
ACCCGCCAGT ACTGGTCGCT CGGCCACCTC GACGCCCCGC GCTACCTGGA CCGTCCCGTC
TACGTCCTGA CCGGCGCGCG CACCTTCTCC GGCGGCGAGG ACCTGGCGTA CACCTTGCAG
GGACTGCGGC GCGCGACGCT GATCGGCGCC ACCACGCGCG GCGGCGCGCA TCCCACTGAC
TGGTACCAGC TCACCGAGCA TGTGACCGTC ACCGTGCCGA ACTGCCGCTC GGAGAGCCCG
TTCACCGGCA CGGACTGGGA GGGCGTCGGC GTCGTCCCGG ACCTCGCGGT CGCCGAGGAC
GAGGCGCTGA CCGCCGCGAT CGAGCACGCG AAGCTGTCGA TCGGCGCCGA TGCAGATCGT
CCCTAG
 
Protein sequence
MILEPKVLDA ALARFETEYI DPDKAARAAA EIRRAAAAGE YAQLDGAAAC AAVTKVFADV 
CQDKHLRLIW SEEPEPLEDD DEEAGAAMFA ALCREHNNGV RKVEVLDGGI GYLDLTLIPT
AEIGGATIAA AMQLLAGTRA LIVDLRSTIG GSTDGVQLWC SYLIRGADTL LTTSHSVVKG
TRQYWSLGHL DAPRYLDRPV YVLTGARTFS GGEDLAYTLQ GLRRATLIGA TTRGGAHPTD
WYQLTEHVTV TVPNCRSESP FTGTDWEGVG VVPDLAVAED EALTAAIEHA KLSIGADADR
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