| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8852 |
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| Symbol | |
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| ID | 8340245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10264169 |
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| End bp | 10265515 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644961942 |
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| Product | amino acid/amide ABC transporter substrate- binding protein, HAAT family |
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| Protein accession | YP_003119506 |
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| Protein GI | 256397942 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.132899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGGA TCTTCCTGCT CGGAGCGGGT CTGAGCCTGC TCGCGACCGC GGCCTGCGGG
ACCCGGCTGC CGGACTCCGC CTTCGCCTCG CAGAGCCCCG GCGCGGCTGG GACGTCCGGC
GCTCCCGCCG CGAATCCGGC CAGCGACGTG GGTGTCACCC CGACCTCGAT CAAGATCGGG
ATGATCGACT CGGTGGACTC GCTGCTCGGC CCGGACACCT TCTCCGGTCC GATGTACGGC
GCGCAGGCGT TCTTCAAAGC GCTGAACGCC GCCGGCGGCG TCAACGGCAG GAAGATCGAT
ATCGCGACCT GCGATGACGA GGGCGTCGGC GGGACCGACG TGTCCTGCGC GCACACGCTG
ATCGACCAGG ACAAGGTGTT CGCCTTCTCC GGAAACTCGA TCTTCCAGTA CGACGCCGCG
TCCTACGTCT CGGCGAAGGG CGTGCCGGAC ATCGGCGGCG AGCCGATCAG CAACGCCTAC
GACCAGTACC CGCACCTGTA CTCGATCTAC GGCAGCGACT ATCCGCGCGA CGGCAAGAGC
ATCGGGTGGC AGGGGAAGCT GTATTCCTCC ACCGAGCCGG AGCATTACGC GAAGACCGTG
TTGAAGGCGC ACGTCGCCGG GCTCGTGTCG TACAACCAGG CGGACTCGGC GCGGTACGCC
GCCTATGAGG CGCAGGCTCT GCGCGCCGAG GGGTTCACGG TCGTGCCGGA GCAGTTGGAT
ATCGCCTTGG CGGACTTCGA CTCCGCCGCT CTGGACATGA AGAACAAGGG TGTGGACGTC
GTCTTCGACA CCATCGACAC GGACGGAAAC GCCCGGCTGT GCAAGGCGAT CGAGGACACC
GGGGTGCCGA TCAAGGCGAA GATGACGACG GTGCAGAGTT GGGACGCCAC GGTCGCCACG
ACGTACAAGG ACGCGCCGAA GTGCCGGAAC CTGTTGTACG CCAACTCCTC CGACGCGAAC
TATGAGGACG TGTCGAACCC GGCGGTGAAG GCGTTCCGGG ACGCGATGGC GAAGTACTTC
CCGGACCGGC AGGGGAAGTT GTCGGAGTGG GAGATCGACG GCTGGGCCTC GGCGCAGTGG
CTCACCGACG CGGTGGCTTC GTGCGGGGCG GACGTGACGC GGGTGTGCGT CGAGAAGTTC
ATGAATTCGG GGAAGCCTTA TGACGCGCAC GGGATCATCA CGCCGGCGGC GTTCGAGGTG
AAGGCGCCGA CGGGGACGAC GCACGCGTGC TTCAACGTGG CGCAATGGCA GGACTCTGCG
AACGGTGGGC AGGGCGGGTG GGTGACGCGA GTGCCGGATA TGGACACGAA TTGCTATGAC
GTGCCTCAGG TCTCTTATTC GCCTTAG
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| Protein sequence | MRRIFLLGAG LSLLATAACG TRLPDSAFAS QSPGAAGTSG APAANPASDV GVTPTSIKIG
MIDSVDSLLG PDTFSGPMYG AQAFFKALNA AGGVNGRKID IATCDDEGVG GTDVSCAHTL
IDQDKVFAFS GNSIFQYDAA SYVSAKGVPD IGGEPISNAY DQYPHLYSIY GSDYPRDGKS
IGWQGKLYSS TEPEHYAKTV LKAHVAGLVS YNQADSARYA AYEAQALRAE GFTVVPEQLD
IALADFDSAA LDMKNKGVDV VFDTIDTDGN ARLCKAIEDT GVPIKAKMTT VQSWDATVAT
TYKDAPKCRN LLYANSSDAN YEDVSNPAVK AFRDAMAKYF PDRQGKLSEW EIDGWASAQW
LTDAVASCGA DVTRVCVEKF MNSGKPYDAH GIITPAAFEV KAPTGTTHAC FNVAQWQDSA
NGGQGGWVTR VPDMDTNCYD VPQVSYSP
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