| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8807 |
|---|
| Symbol | |
|---|
| ID | 8340200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 10211711 |
|---|
| End bp | 10212358 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644961897 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003119461 |
|---|
| Protein GI | 256397897 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAG CTCAGAACTC CGCGGCCGGC GCGACCCGCC GCTCTCCGCT CGCCCTCGCG
GTCCTCGCCC TGCTCGGCTA CAAGCCGCTG CACCCGTACG GCGTGCAGCG GCTTCTCAAG
GAATGGGGCA AGGAGAACGT CGTCAACGTC GGACAGCGCG CGAGCCTGTA CAAGACGATG
GAGCGGCTCA CGGCGGCCGG GCTGATCGCG GTCCGGGAGA CCGAGCGCGA CCAGCAGTAC
CCGGAGCGGA CCGTCTACGA GCTCACCGAC GCCGGACGCG AGGCGGCGCG GGCGTGGATC
GACGACATCG TGCGCGTGCC GCGACCGGAG TATCCGGAGT TCCCCGCCGC GCTGTCGTTC
CTGATGGTGC TGGAGCCGGA GGTGGTGCTG GCCGCGTTGA GCGAGCGGCG TGAGACCGTC
GCGAAGACGT TGGCTCAGGC GAAGCAGGGT ATGGCGGAGG CGCGGCAGTA CGGGCTACCG
AAGGTGACGC TGCTGGACGA CGAGTACTTG GTCGCGGTCA CCGAGGCCGA GTTGCGGTGG
ATCGAAGGCG TGGTCGCGGA GTTGGAGAGC GGCGAGCTGA CGTGGAGCTT GGCGGAGTTG
CAGCCGTTCG ACGAGGCCGA CACCGATGCC GGGACGCCTG GTACTTAG
|
|---|
| Protein sequence | MAAAQNSAAG ATRRSPLALA VLALLGYKPL HPYGVQRLLK EWGKENVVNV GQRASLYKTM
ERLTAAGLIA VRETERDQQY PERTVYELTD AGREAARAWI DDIVRVPRPE YPEFPAALSF
LMVLEPEVVL AALSERRETV AKTLAQAKQG MAEARQYGLP KVTLLDDEYL VAVTEAELRW
IEGVVAELES GELTWSLAEL QPFDEADTDA GTPGT
|
|---|
| |