| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8800 |
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| Symbol | |
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| ID | 8340193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10203339 |
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| End bp | 10204607 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644961890 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_003119454 |
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| Protein GI | 256397890 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.803536 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGTGG CGCGTGCCAT CGCCCGGCTC GTGGCGGAGG GTGTGGTCCT CACCCGCACG
GGAAGCGGTA CGTTCGTCGC TCCCCGGCCT CGGCGGGAAA GTGCTATCGC CGACACCGCC
TGGCAGACGG TAGCGCTGGC GGACCGCTTC GTCGGTACCG ACCAGATCAC CGCGGCTCTC
GGTCCGGCGC CCGAGGGCAC GATCCTGCTC GACGGCGGCT ATCTGCACCG CACGCTGCAA
CCGACCGGGC TTCTCGGCTC TGCCCTGGCC CGCGCCGCAC GCCGCATCGA CGTGTGGGAC
CGCGCGCCGG TCGTCGGGCT GGAGGCGCTG CGCTCGATGT TCGCACGCTC CGTCGGCGGT
GGGGTGGGTG CCGAAGACGT ACTGATCACC TCGGGAGGGC AAAGCGCGCT GTCGCTGACG
TTCCGCGCGC TCGCGGCGCC GGGCAGCCCG ATTCTGATGG AGTCGCCCAC TTATCCGGTG
GCGATCGAGG CGGCTCGCGC TGCCGGGCTG CGTCCGGTGC CGGTGCCGAT CGACGATGAC
GGGATCCGGC CGGACCTGCT CGCGGAGGCG TTCGCGATGA CCGGTGCCCG ACTGCTGTAC
TGCCAGCCGA CGTTCCACAA TCCAACCGGA ACCGTCCTCA CCACTGAGCG GCGGCGCCAG
GTCGTCGACA TCGCGCGGGC TTGCGGCGCC TTCCTGATCG AGGACGACTT CGCCCGCCTG
CTCGGCCACG GTTCGCCGGT TCCGCCGCCG CTGGCCTGGG ACGACCGCGA CGGGACGGTC
GTGTACCTCA CGTCGCTGAC GAAGCCGGCG GCGCCGAGCC TGCGCGTCGG CGCGCTTGTG
GCGCGCGGTC CTGTGATGGA ACGGCTGCGT GCGCTGCGCC GCCTCGACGA CTTCTTCGTG
GCGCGCCCCA TGCAGGAGGC GGCACTGGAG ATCCTGGGCT CACCGTCCTG GGATCGGCAT
CTCAGGACTG TGAGTGCGGC GCTGCGCGAG CGCTGCGCGC TGGCTGCCGG AGCCGTGGCG
ATCGCGCGTC CGGACTGGAC CGTGACGCGC GTGCCGGCAG GCGGGCTGCA TCTGTGGATC
CGGCTCGCAC CCGGCGAGGA CGACCTAGCC GTGGTGCGTG ACGCCCGCCG CCGGGGCGTC
GCCGTGAGTC CTGGACGCGG CACCTTCGCC GCCGAGGCAC CTGCGGCGTA CGTCCGCCTC
GGCTTCGCCG CCGCCGCGGA CCATGCCGAA CTGACTGAGG GGATTCGGCG GCTGACCGCG
TCGGGCTGA
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| Protein sequence | MTVARAIARL VAEGVVLTRT GSGTFVAPRP RRESAIADTA WQTVALADRF VGTDQITAAL
GPAPEGTILL DGGYLHRTLQ PTGLLGSALA RAARRIDVWD RAPVVGLEAL RSMFARSVGG
GVGAEDVLIT SGGQSALSLT FRALAAPGSP ILMESPTYPV AIEAARAAGL RPVPVPIDDD
GIRPDLLAEA FAMTGARLLY CQPTFHNPTG TVLTTERRRQ VVDIARACGA FLIEDDFARL
LGHGSPVPPP LAWDDRDGTV VYLTSLTKPA APSLRVGALV ARGPVMERLR ALRRLDDFFV
ARPMQEAALE ILGSPSWDRH LRTVSAALRE RCALAAGAVA IARPDWTVTR VPAGGLHLWI
RLAPGEDDLA VVRDARRRGV AVSPGRGTFA AEAPAAYVRL GFAAAADHAE LTEGIRRLTA
SG
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