Gene Caci_8777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8777 
Symbol 
ID8340169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10178081 
End bp10179490 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content73% 
IMG OID644961868 
Producttranscriptional regulator 
Protein accessionYP_003119433 
Protein GI256397869 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.756748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGGGC ACCGAGGGCC GCGTGAGCCC AATCGGAGAC TCGCCGAGCT GATCGCCGAA 
GCCGGCTGCT CGAACGCCGG TCTGGCCCGG AGGGTGAATC TGGCCGGGGC GGAGCTTGGC
CTGGACCTGC GCTATGACAA GACATCGGTG GCGCGCTGGC TGCGCGGACA GCAGCCGCGG
GCCACCACGC CGGCGTTGAT CGCCGAAGCC GTGGGCCGCA AACTCGGCCG GCCGGTCACC
GTCGAGGAGA TCGGCATGGT CGACGAACGC GACGGGAGTT CCTCCCTCGC GCTCAATCTG
GCCGCCGACA CCCAGGAGGC GATCGCGGTC GCGGCGGGGC TGTGGCGCGC CGACTCCGCC
GGGCGCGAAC AGCTGCGCGC GGCCTCGTTC GCGGTCACCG CGATGGTCGG ACCGAGCCGG
GACTGGCTCA TCATGCCGGA GGACCCGGTG GTGGCCCGGG GCATGGCCGC CGCGAAGAAC
GGACACGCCC CGCTGCGCGT CGGCTTGTCC GACGTCGCCG CCGTGCGAGC CGCCACGGAC
TCCTTCCGCG CGCTGGACCA CCGCTTCGGC GGCGGGCACG TGCGGGTGCT GGCCGTGCGC
TACCTCGACG GAGTCGTCAC CGAACTGCTG CGCGGTACTT ATCCCGAGCG CGTTGGGCGC
CAGTTGTTCG CCGCCGCTGC CGCGCTGACG GAACTGGCCG GCTACCTCGC CTGCGATACC
GGCCGCCTCG GTCTGGCGCA GCGGTACTAC ATCCAGGCCC TGAGACTGTC GCAGGCGGCC
GGCGACCGGG CGCACGGCGG GCACATCCTG TCGGCGATGA GCCACCTGGC CAACTCGCTC
GGCGCGCCGC GCGAGACGGT GCAGCTGGCG CGGTCGGCGG ACGAGGGAGC GCGGGGGACC
GCGTCGCCGC ATGTGCGCGC GGAGTTCTTC TGCGCCGAGG CGCGCGGGTA CGCCGCGATG
CGCGACCGGC GCGCGGCCGA GCAGGCACTC GGCCGGGCCA GCGACGAACT GGAGCGCAGC
GGCGGGGACG CGCCGGTCTG GTCCTCCTAC TTCGACCACC ACTACATCGC CGACGCCGCG
GCCGCCTGCC ATCGCGATCT GGAGCAGCCG CGCCAGGCTG CCGAGCAGGC CGCGCTGGCG
TTGGCCGGCT TCGGTTTGGA CAAGACCAGG CGGCGGGTGC TGAATCTGTT CACCCTCGCC
TCGGCCCGGG TCCAGGGCGG CGAGGTGGAG GCCGGGTGTG CGGCGGCGAC GGAGGCGGTG
AAGCTGTCCG GCCGGGCCCG CTCGGCGCGG GCGGTGGAGG CGCTTCACGA TTTCGACCGA
CGGTTGGATC CCTACGCGGC GGTGGCGGCG ACCCGGGAAT TCCGCAGCTT GATTGCCTTG
CGAAGGCCTG GCGAACCCAT CAACGCCTGA
 
Protein sequence
MEGHRGPREP NRRLAELIAE AGCSNAGLAR RVNLAGAELG LDLRYDKTSV ARWLRGQQPR 
ATTPALIAEA VGRKLGRPVT VEEIGMVDER DGSSSLALNL AADTQEAIAV AAGLWRADSA
GREQLRAASF AVTAMVGPSR DWLIMPEDPV VARGMAAAKN GHAPLRVGLS DVAAVRAATD
SFRALDHRFG GGHVRVLAVR YLDGVVTELL RGTYPERVGR QLFAAAAALT ELAGYLACDT
GRLGLAQRYY IQALRLSQAA GDRAHGGHIL SAMSHLANSL GAPRETVQLA RSADEGARGT
ASPHVRAEFF CAEARGYAAM RDRRAAEQAL GRASDELERS GGDAPVWSSY FDHHYIADAA
AACHRDLEQP RQAAEQAALA LAGFGLDKTR RRVLNLFTLA SARVQGGEVE AGCAAATEAV
KLSGRARSAR AVEALHDFDR RLDPYAAVAA TREFRSLIAL RRPGEPINA