| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8749 |
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| Symbol | |
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| ID | 8340141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10146708 |
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| End bp | 10147661 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961840 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003119405 |
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| Protein GI | 256397841 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.199675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGACT TCCTGGCAGG CAAGGTCATC GTGGTGACCG GCGCGGGGCG GGGCATCGGG
CGCGCCGTGG CCCTCGGCTG CGCCGCGGAG GGCGCCTCGG TGGTCGTGAA CGACTACGGC
GTCTCCGTCG ACGGCAGCGA ACCCTCCAGC GAGGTCGCCG ACGCGGTGGC GCAGGAGATC
CGCGACGCCG GCGGGCAGGC GGTGCCCTGC GCGGACTCCG TCACCACCCT GGCCGGCGGG
CACCGGATCG TGCAGACCGC CGTCGACGCC TACGCCCGCG TCGACGGCGT GGTGTGCGTG
GCGGGCATCC TGCGCGAGCG GATGCTGTTC AACATGGCCG AGGACGAGTG GGATCCGGTC
ATCGAGACCC ATCTGAAGGG CACGTTCACC GTCTTCCGCG CCGCCAGCGC CGTGATGCGC
AAGGCCGGCG GCGGCGCGCT GATCGGCTTC ACCTCCGGCA ACCACGCCGG CAGCGTGTCG
CAGGCGAACT ACAGCGCAGC CAAGGGCGGC ATCGTGAGCC TGGTCCGCAG CGCGGCGCTC
GGCCTGGGCA AGTACGGCAT CACCGCGAAC GCCGTCGCGC CGGTCGCGCG CACCCGGATG
AGCGCCAACG TCCCGTTCGA CATGGCCGAG ATGGGCGAGC CGGAGGACGT CGCGCCGCTG
GTCGCCTACC TGCTCTCGGA CGCCGCGCGC GATGTCACCG GCCAGATCTA CACCGTCGCC
GGGCGCCGCA TCGCGGTGTG GAACCAGCCG CAGGAGATCC GCTCGATGTA CGGCGAGGAA
CCCTGGACCG CCGAGTCGAT CGCGAAACGG CTGCCGGAGG CGATCGGCGT CGAGACGATG
CCGATGATCG CCAAGCTCGC CGCCTACACG CAGGCGACCG AGGAGCGGAA GGCAACCAAG
ACAGAACAGC CCGGACAGCC TGCACAGCCC GGACAGGAAG GCGCGGCATC ATGA
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| Protein sequence | MADFLAGKVI VVTGAGRGIG RAVALGCAAE GASVVVNDYG VSVDGSEPSS EVADAVAQEI
RDAGGQAVPC ADSVTTLAGG HRIVQTAVDA YARVDGVVCV AGILRERMLF NMAEDEWDPV
IETHLKGTFT VFRAASAVMR KAGGGALIGF TSGNHAGSVS QANYSAAKGG IVSLVRSAAL
GLGKYGITAN AVAPVARTRM SANVPFDMAE MGEPEDVAPL VAYLLSDAAR DVTGQIYTVA
GRRIAVWNQP QEIRSMYGEE PWTAESIAKR LPEAIGVETM PMIAKLAAYT QATEERKATK
TEQPGQPAQP GQEGAAS
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