| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8746 |
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| Symbol | |
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| ID | 8340138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10140125 |
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| End bp | 10142203 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644961837 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003119402 |
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| Protein GI | 256397838 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.400564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCTG ACAAGAACGA TCCACGGCAT TCGCAAGGCG GGAGCGGCGG TGGAGCGGGA
CGGGCACGAG GCAGCGGACG GAGCGAGCAC GTATCAGGGC TGCGCGACGC GATCGCGTTC
CTGAACCGCG AGAGCATTGC CCTCCCCGAT CCCGGCACGC CGCCGTGGGA GGGCCGCCAG
CCCGCCGACC CGCCGCCGTC CGCCGCCGGC GGACCGAAGC CGCCGCTGGC GCCGGTCCGC
GAACTCGGAC CGGCGCAGGG CCGACCGCCG GCGCACGCTC TGCCGCCCGC CCCGCCGCCG
GTCGTCGGCA ACGCCATGCA GTTCCGGAGC TCGCCGGGCG CCAGCCGCCG CCAGCTTCCC
CCGCCGCCGT CGCAGAGCTC TGCGCCGCTT CCGCCTCCCG CGCCGCCTGC GCCGCCCCAA
TTGCCTCCGC CTCCGCCGCC CCAGATGGAC GACCAGACGA ACCGCTCACG CCACGAACTC
GCGCTCCGCT TCGGCGGCGG CTCGGAGTAC CCGACCGGTC CCAAGCCCGC TCAAGGGATC
CACGCTTTCT CCGCCGTCGA CTGGACCGGC ATCGACGCCA TCCGCAAACA GGTGCGCGAG
CGGATCACCG AGCAGTTCCC GCCCTCCGAC GCCGGCAGTG AGGAGCAGCG CCGGGCGTTC
GGCATGGCGG TCATCGAGGA AGCGGTGAAC TCCTGGTCGT CGCGGGCCAC GGCGCGCGGG
CAGTCGGTCG ACGACGCGCG GCAGGACGCG ATGCGCCGGG CCGCGGGCGC CACCGTCTTC
GGCATGGGCG GTCTGGCGCC GATGCTGGAC CATCCCGACG TCGAGACCAT CGAGTACCGG
GGCTGCGACG ACGGGCACGT GGTCTTCACC GACGGCCGCG TGGAGAAGGC GCCGAGGATC
GCCTCCTCGG ACGAGTCGCT GCTCACCGAC GTGCGGACGT GGGCTGCGCG GCGTCATCGG
GTCCTGACAC CGGCCGAGCC GCTGCTCGAC CTGACCGTGG ACGGCGGCGC GCGGCTGACC
GCGACGATCG GCGTGTCGAA GCGCCCGACG CTGGTCGTGC GCCGGCACCG GGTCGTGAAG
GTGACGCTGG ACGATCTGGT GGTGCGCGGC ATGGTGTCGC CGGCGATCGC GGCGTTCCTG
CGCAGCGCGG TGCTGGCCGG ACAGACGATC GTGGTCACCG GTCCGCTCGA CGCCGGCAAG
ACGACGCTGC TGCGCGCGCT GGCCGCCGAG ATCCCGGTGA TGGAGCGCTA CGCGACGGTC
GAGGCAGAGT TCGAACTCAA CCTGGACGAG GTCGGGCGGC ATCCGCGGAT GGTCGCCTAC
CAGTCGTGGC CGGGGACCGC CGAGCGCGGT CCGGACGGCC GCCGGGTCGG CGAGGTGACG
CTGTCCGACG TCATCGAGGT GGCGCTGCGG ATGAACGTGG CGCGGCTGGT CGTCGGCGAG
GTGCGCGGAC CGGAGGCGGC GACGCTGCTG GAAGCGGTGT CGACCGGCGG CCGGGCAGCG
CTGTGCGCGA TTCACGCCGG GTCGGCGCGC GAGGCGTTCA ACAAGTTCGT GATGCTGTGC
ATGCGCACGA CGATGAGCCG GGACTCCGCG GTGCAGCTCG CCGCCGAGAC GTTGCACTAT
GTCGTGGACA TCCGCATGGA CACCGAGCCG GCGACGGACA TGCGCGAGCC GCGGCCGACT
GGACGGTACG TCGACCGGGT CGTGGAGATC AACGGGCTCG GCGATCGGCT GGCGCCGGTC
GTCACCGAGG TGTTCGCGCC CGGACCGGAC GGCCGCGCGG TGTTCGCGCA GCGTCCCGAG
CGGCTCGCGA CGTTGCAGCG CGCGGGGTTC GACCCCAAGT GGTTCCTGTA CGGGAACGAC
CAGTGGTACG TCGCGCCGGT CCCGGCGGCG CAGAACGTCT CGCGTCCCGC GCCGCACCAG
CAGCAGTCGC AGCACTCGCA GTCGCAGCAC CAGCAGCGCG AAGGCGGCGG CGGGCGCAGC
TTCCAGAACA TGACTCCGGT GCCGAAGCCG TCCCTGACCG AGCAGGACGT CTTCGACCGG
CAGTACCTCC ACGAGCGGCG GCGGTTGGAC CAGGAGTGA
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| Protein sequence | MPADKNDPRH SQGGSGGGAG RARGSGRSEH VSGLRDAIAF LNRESIALPD PGTPPWEGRQ
PADPPPSAAG GPKPPLAPVR ELGPAQGRPP AHALPPAPPP VVGNAMQFRS SPGASRRQLP
PPPSQSSAPL PPPAPPAPPQ LPPPPPPQMD DQTNRSRHEL ALRFGGGSEY PTGPKPAQGI
HAFSAVDWTG IDAIRKQVRE RITEQFPPSD AGSEEQRRAF GMAVIEEAVN SWSSRATARG
QSVDDARQDA MRRAAGATVF GMGGLAPMLD HPDVETIEYR GCDDGHVVFT DGRVEKAPRI
ASSDESLLTD VRTWAARRHR VLTPAEPLLD LTVDGGARLT ATIGVSKRPT LVVRRHRVVK
VTLDDLVVRG MVSPAIAAFL RSAVLAGQTI VVTGPLDAGK TTLLRALAAE IPVMERYATV
EAEFELNLDE VGRHPRMVAY QSWPGTAERG PDGRRVGEVT LSDVIEVALR MNVARLVVGE
VRGPEAATLL EAVSTGGRAA LCAIHAGSAR EAFNKFVMLC MRTTMSRDSA VQLAAETLHY
VVDIRMDTEP ATDMREPRPT GRYVDRVVEI NGLGDRLAPV VTEVFAPGPD GRAVFAQRPE
RLATLQRAGF DPKWFLYGND QWYVAPVPAA QNVSRPAPHQ QQSQHSQSQH QQREGGGGRS
FQNMTPVPKP SLTEQDVFDR QYLHERRRLD QE
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