| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8716 |
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| Symbol | |
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| ID | 8340107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10105367 |
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| End bp | 10107604 |
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| Gene Length | 2238 bp |
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| Protein Length | 745 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644961806 |
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| Product | MMPL domain protein |
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| Protein accession | YP_003119372 |
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| Protein GI | 256397808 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.14053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00441671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCACGC TAACAGCACG CCCGCCTGTG GTGGAACGGG TGGCGGGCTG GAGTGCCCGC
CACCGCAAGA CCACGGTCTT CGGCTGGCTC ATCCTGATCA TCGCCGCGGT GGTGATCGGC
GGGATGGCCT CCGGTACCAA GAAGACCCCC TACGACCCCG GCGAGGCGGG GCGCGCCGAG
CGCGCGCTGG ACGCCTCCGG TATCTCCCAG CAGACGGAAA GCGTTCTCGT GCAGAGCCGA
TCAGGGGCGG CTTTCGCGAC GAACACGGAC TTCCGCAACG GAGTCTCTGA TGTAGCCGCC
GCACTCCGCG CGATTCCAGG CTCCGCGGCG CAGGTCCGCT CTCCTCTGGA CAACGCTAAG
GAGACCAAGG CACTGGTCTC TAAGGACGGA CGCTCCGCAC TGGTCACCTT CGTGGTCGCC
GGGAACAAGG ACGACGCGGA CAAGACCGTC GCGAAGCCAC TGACGACCGT CGCGCAGATC
CAGGCGGCGC ATCCCGGACT CCGCGTGGAG GAAGCCGGCT CGGCGTCCGT CGACAAGACG
GTCAACGACA TCATCTCCAC CGGCTTGCAG CGCGCGGAGT TCAGCTCGGT CCCGGTCACC
CTGGTCCTGC TGCTCCTGGT GTTCGGCGCG CTGGTCGCCG CCTCGATCCC GCTGCTGCTG
GCGCTGACCG CGGTGGTCGC GGGCATCTCC CTGATGTCCA TCCCGGGCCA CTGGGTCCCG
ATCAGCGACA GCACGTCCTC GGTGGTGCTG CTCATCGGTA TGGCTGTCGG CGTCGACTAC
TCGCTCTTCT ACATCCGCCG AGAACGTGAG GAGCGCGCTC TGGGCAAGTC TCCTAGGGAG
GCGCTGCGGA TCGCGGCGAG CACCTCGGGC CGCTCGATCG TGGTCTCCGG TCTGACCGTG
ATGGCCTGCC TCGCCGGTCT GTTCTTCACC CAGATGGACG CGTTCTCCGG CTGGTCCGTC
GGCACCATCC TGGTGGTCGG CATGGCGATG CTGGGCTCGG TCACCGTGGT CCCGGCGATG
CTGTCCTGGC TCGGCGACAA GCTCGACAAG GGGCGCGTGC CGTTCGTGGG CAAGCGCCGC
ACGGTGGCGC GGGAGTCGCG GTTCTGGAGC TTCCTGGTCC GCAACGTCGT CAAGCGTCCG
CTGCTGTGGG GACTCCCCGC ACTTCTCGCC CTGCTCGCCC TGGCGGGGAT CGGCGCCGGG
CTGAAGGCGA AGGACCCCGG CGGCGTCGCC CTCACCTACG GCAAGCCGAT CAGCCAGACG
CTGGACCGCA TGCAGACGGC GTTCCCGGGC GGACCCGCGC CGGCGCAGCT GATGGTGCAC
GGCGACCCGA AGGTGCTGAA GGGCTCTGAG TTCACCGGCG CGGTCGCCGC GATGGAGCGG
ATGCTCCCCA ACGGCGCGCA GGTGACCACC CAGACCAGCA CCGACGGCAG CTACGAGGCG
ATCTCGGTCC CGCTGGCCGG CGACGGCGCG GACAGCGCCT CGGTGGCGGC CCTGAAGAAC
CTGCGCTCCG AGGTCCTGCC GGCCACCCTC GGCCACGTCC CCGGCATCGA CTACAGCGTC
GGCGGCCAGG CGGCCGGCCA GGCCGACTTC GGCGGCCGGC TGCACAGCAC GACGCCGATC
GTCATCGCTT TCGTGCTCCT GCTCGCCTTC GTGCTGATGG TCGCGGCGTT CCGCTCCCTG
GCGATCCCGT TGACCGCGAT CGCCGTGAAC CTGCTCTCGG TCGGCGCGTC CTACGGCGTC
GTGAAGTGGA TCTTCCAGGA CGGACACCTG GAGAAGCAGC TCGGCTTCCA GTCCTACGGC
GCCGTGATCT CCTGGCTCCC GCTGTTCATG TTCGTGATCC TGTTCGGACT GTCCATGGAC
TACCACGTGT TCGTCCTCAG CCGGATCAGG GAGCTGCGGC TGCGCGGCGT GTCGACGAAG
CAGGCCGTGG TCCGGGGCGT CAGCTCCTCC TCGGGCGTGG TGAGCAGCGC GGCGCTGATC
ATGGCGGCGG TGTTCTCGCT GTTCGCCTTC ATGCCGTTCG CGCCGATGAA GATGGTCGGC
ATCGGCATGG CGGTCGCAGT GGCGATCGAC GCCACGCTCG TCCGCGGGCT GCTGGTCCCG
GCGATCATGA GCCTGCTGGG TGAGCGGAAC TGGCAGCTGC CGCGGGCGCT GCGGTGGATT
CCGGGTCTCG CTCTGGAGAA GTCGGCAGCA CCCGCACCGG CGCCGACATA TGCGCGCCCC
ACGGTGCCGA TCGCCTAG
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| Protein sequence | MSTLTARPPV VERVAGWSAR HRKTTVFGWL ILIIAAVVIG GMASGTKKTP YDPGEAGRAE
RALDASGISQ QTESVLVQSR SGAAFATNTD FRNGVSDVAA ALRAIPGSAA QVRSPLDNAK
ETKALVSKDG RSALVTFVVA GNKDDADKTV AKPLTTVAQI QAAHPGLRVE EAGSASVDKT
VNDIISTGLQ RAEFSSVPVT LVLLLLVFGA LVAASIPLLL ALTAVVAGIS LMSIPGHWVP
ISDSTSSVVL LIGMAVGVDY SLFYIRRERE ERALGKSPRE ALRIAASTSG RSIVVSGLTV
MACLAGLFFT QMDAFSGWSV GTILVVGMAM LGSVTVVPAM LSWLGDKLDK GRVPFVGKRR
TVARESRFWS FLVRNVVKRP LLWGLPALLA LLALAGIGAG LKAKDPGGVA LTYGKPISQT
LDRMQTAFPG GPAPAQLMVH GDPKVLKGSE FTGAVAAMER MLPNGAQVTT QTSTDGSYEA
ISVPLAGDGA DSASVAALKN LRSEVLPATL GHVPGIDYSV GGQAAGQADF GGRLHSTTPI
VIAFVLLLAF VLMVAAFRSL AIPLTAIAVN LLSVGASYGV VKWIFQDGHL EKQLGFQSYG
AVISWLPLFM FVILFGLSMD YHVFVLSRIR ELRLRGVSTK QAVVRGVSSS SGVVSSAALI
MAAVFSLFAF MPFAPMKMVG IGMAVAVAID ATLVRGLLVP AIMSLLGERN WQLPRALRWI
PGLALEKSAA PAPAPTYARP TVPIA
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