| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8705 |
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| Symbol | |
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| ID | 8340087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10088431 |
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| End bp | 10090065 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644961786 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003119361 |
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| Protein GI | 256397797 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.354023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGA TCCGCTCGTC CCGTCCACAA GCCCTCGACC CCGCCGACTC CGCCGACACT
GCCGTCCAAG ACCCTCGGCA GCGGCGCTCG ATCCTGGTGG CCGTCTGCAT CGCGCTCATG
GCGGTCATCG CCTCGGTCTC CGGGCTGAGC GTCGCGCAGC CGGAGCTGTC GGCGTCGTTC
GGCGCCTCGC AGACCGAGGT CCTGTGGATC ATCAACGTCT ACACCATCAC CCTGGCCGCG
CTGCTGCTGC CGCTCGGCGC GCTCGGCGAC CGCCTGGGCC GCAAGCCGAT GCTGCTGGCG
GGGCTGCTCG TCTTCGGCGT CGCCAGCGCG GCCGCCGGCC TGGCCGGTTC GCCGGAGGTC
ATGCTCGGCG CCCGCTTCCT CAGCGGCGTC GGCGCGGCGA TGATCATGCC GGTCACGCTC
GCCGTCATCA CTTCGACGTT CCCGGAGGAG GAGCGGGCGA AGGCGATCGG CGTCTGGACC
GGCGTCGCCG GCGGCGGGGG CATCCTCGGG ATGTTCCTGT CCGCGGCCCT CGTCGACCTG
GCGAGCTGGC GGTGGCTGTT CGTACTGCCG GTCGTGCTGG TCGTGGTGGC CGGCGCGCTG
GCCCTGCGCT CGATCCCCAA CTCCCGCCAG GCAGCGGAGC ACCGCTTCGA CACGGTCGGC
GCGCTGACGT CGCTGGTCGC CGTGGTCGGA CTCGTCTACT TCCTGCACGA GGGCCCTGAC
AGCGGCTGGA CCGCACCGGC GACGCTGGTG AGCGGGCTGA TCGGCGTACT CGGCGGCGCC
GGATTCGTGC TCTGGGAACT GCGCAGCGCG GCTCCCCTGC TCGACGTCCG CCTGTTCCGC
GAGCGCCGCC TCGCCGGCGG CTCGATGTCG CTGCTCGCCG TCTTCGGCGT CCAGGCGGGC
ATCTTCGTGG TCCTGTTCCC GTTCCTCCAG GCGGTCCTCG GCTGGTCGAG CCTGCACTCC
ACCCTGGCGA TGATGCCGAT GGCCCTCCTG ATGATGGCCG CCTCCGGCCT CGCCCCCCGC
CTGGCACCCC GCATCGGCAG CCGCGCGACC ATGGCCACCG GCATCCTGGT GAGCGCCGCA
GGCCTCGCCC TCATGGCCGC CCTGGTCTCA GTCACCGGCG GCTACCTGTC GATCCTGCCC
GGCATGCTCG CCATGGGCCT CGGCATGGGC CTGACAATGA CCCCCGCCAC CGAGGCCATC
ACCAGCTCCC TCCCCCACGA CAAGCAAGGC GTCGGCTCCG CCCTCAACGA CGTCACCCGC
GAATTCGGCA CCGCCCTAGG CGTCGCCCTC CTCGGCGCAA TAGTCACCGC CGGCTACCGC
AGCACCATCA GCCCAAAGCT GCACGCAATC CCACCCCACA TCGCCGAAAC CGCCCGCCAA
GGCATCGCCA ACGCCCTCAC CACCGCCCCC ACCGCAGGCA CGCAAGCCCA AGCCCTCAAA
CTCGCCGCCC GCGACTCCTT CGTCAGCGGC TGGCAGAACG CGATGTGGGC AGGCGCCGCG
GTGATGGCGA TCGTGTTCGT GGTGATCGCG ATGCCCGGCA TACGGCGGCG GTCGCAGGCT
GTGGAAACCC AGAGCGAGAG CTCGGTCGCT CCACAGCAAG CGTCCGGCCT CGAAGACCTC
ACCGCGAAGC GCTAG
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| Protein sequence | MPMIRSSRPQ ALDPADSADT AVQDPRQRRS ILVAVCIALM AVIASVSGLS VAQPELSASF
GASQTEVLWI INVYTITLAA LLLPLGALGD RLGRKPMLLA GLLVFGVASA AAGLAGSPEV
MLGARFLSGV GAAMIMPVTL AVITSTFPEE ERAKAIGVWT GVAGGGGILG MFLSAALVDL
ASWRWLFVLP VVLVVVAGAL ALRSIPNSRQ AAEHRFDTVG ALTSLVAVVG LVYFLHEGPD
SGWTAPATLV SGLIGVLGGA GFVLWELRSA APLLDVRLFR ERRLAGGSMS LLAVFGVQAG
IFVVLFPFLQ AVLGWSSLHS TLAMMPMALL MMAASGLAPR LAPRIGSRAT MATGILVSAA
GLALMAALVS VTGGYLSILP GMLAMGLGMG LTMTPATEAI TSSLPHDKQG VGSALNDVTR
EFGTALGVAL LGAIVTAGYR STISPKLHAI PPHIAETARQ GIANALTTAP TAGTQAQALK
LAARDSFVSG WQNAMWAGAA VMAIVFVVIA MPGIRRRSQA VETQSESSVA PQQASGLEDL
TAKR
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