Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8687 |
Symbol | |
ID | 8340069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10074320 |
End bp | 10074850 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644961768 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003119343 |
Protein GI | 256397779 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTCAG CCCGTGCCCG TGTCCTGGAG ACCGCCACCC TGCTCTTCTA TACAGAGGGC ATCCACACGG TGGGGGTCGA TCGGGTGATC GCCGACGCCA AGGTGGCGAA GGCGACGTTC TACCACCACT TCAAGTCCAA GGAAGAGCTG GTCCTGGCCT ATCTGACCGC CGAGTACGGA CGCCAGCGCG ACGTGTTCTC CGGCGTCCCG GGGGTCGGTC TCGAGCGCAT CGAAGCCATC CTGGACAAGC TCGCCGAGGT CAGCGTCGGA CCCGGATTCC GGGGCTGCCC CTTCCTCAAC GCGGCCGCGG AGTTCGCCGA TCCCGGCCAT CCGGTCCGCC ACCTCGTCGA CGACTACCGT GCCTGGTACC GCGATCTGAT GCGCGACATC CTCACCACCG CGGACCGTCC CGACGCCGAC CACAAGGCCG ATCTGCTCCT GCTGGTCCGC GACGGGATCG CCGTCGCCGG CGGCCTCGGC GACAAGAACG CCGTGGAAGC CGGCGTCCGG ACCGCGCTCT CCGCACTGTG A
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Protein sequence | MSSARARVLE TATLLFYTEG IHTVGVDRVI ADAKVAKATF YHHFKSKEEL VLAYLTAEYG RQRDVFSGVP GVGLERIEAI LDKLAEVSVG PGFRGCPFLN AAAEFADPGH PVRHLVDDYR AWYRDLMRDI LTTADRPDAD HKADLLLLVR DGIAVAGGLG DKNAVEAGVR TALSAL
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